RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SMPD4Q9NXE4 827 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 CFAP97Q9P2B7 532 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 DEC1Q9P2X7 70 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 XPR1Q9UBH6 696 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 LHX3Q9UBR4 397 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 VPS9D1Q9Y2B5 631 aa8.12□□□□□ -1.11
CD44-205ENST00000352818 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.12□□□□□ -1.11
CD44-205ENST00000352818 SCN8AQ9UQD0 1980 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 LZTS3O60299 673 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 FZD6O60353 706 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 LYPLA1O75608 230 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 CBX6O95503 412 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 HSPA4LO95757 839 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 GOT2P00505 430 aaKnown RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 PENKP01210 267 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 KRT16P08779 473 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 RBP1P09455 135 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 CD27P26842 260 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 ARRB2P32121 409 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 NUMBP49757 651 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 STC1P52823 247 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 PLK1P53350 603 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 E2F1Q01094 437 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 GALNT1Q10472 559 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 DLG1Q12959 904 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 TUBB3Q13509 450 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 CDH18Q13634 790 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 GALNT3Q14435 633 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 ACAP2Q15057 778 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 MPPE1Q53F39 396 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 ZNF789Q5FWF6 425 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 C3orf38Q5JPI3 329 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 RBM20Q5T481 1227 aaKnown RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 HECTD2Q5U5R9 776 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 AGAP9Q5VTM2 703 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 KLC3Q6P597 504 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 PTAR1Q7Z6K3 402 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 CACUL1Q86Y37 369 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 CARNMT1Q8N4J0 409 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 OR4L1Q8NH43 312 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 BLOC1S5Q8TDH9 187 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 TMA16Q96EY4 203 aaKnown RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 SCYL1Q96KG9 808 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 UBXN10Q96LJ8 280 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 SLC6A18Q96N87 628 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 OLFM1Q99784 485 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 FEM1AQ9BSK4 669 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 C2orf49Q9BVC5 232 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 MMADHCQ9H3L0 296 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 CAAP1Q9H8G2 361 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 ZNF395Q9H8N7 513 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 CATSPERZQ9NTU4 200 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 ARL8BQ9NVJ2 186 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 VPS51Q9UID3 782 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 RUVBL2Q9Y230 463 aaKnown RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 VWA7Q9Y334 891 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 RAP2CQ9Y3L5 183 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 ARL5AQ9Y689 179 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 STON1Q9Y6Q2 735 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 MED13LQ71F56 2210 aa8.11□□□□□ -1.11
CD44-205ENST00000352818 ZFC3H1O60293 1989 aaKnown RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 COL27A1Q8IZC6 1860 aaPredicted RBP8.11□□□□□ -1.11
CD44-205ENST00000352818 NBEAL1Q6ZS30 2694 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 TTC24A2A3L6 582 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 CCDC162PA2VCL2 907 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 C2orf81A6NN90 581 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 F8W8V4 182 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 HGSO14964 777 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 AURKAO14965 403 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 PFDN6O15212 129 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 SLC22A2O15244 555 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 CD3EAPO15446 510 aaKnown RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 SIGLEC6O43699 453 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 DLX3O60479 287 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 SNAP91O60641 907 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 DIAPH2O60879 1101 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 ATP6V1G2O95670 118 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 IGHV4-34P06331 123 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 F7P08709 466 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 LPOP22079 712 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 ATP5F1P24539 256 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 MZF1P28698 734 aaPredicted RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 PRDX6P30041 224 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 GMPRP36959 345 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 CSKP41240 450 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 IDH3AP50213 366 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 SCNN1BP51168 640 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 RHOAP61586 193 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 PRKAA1Q13131 559 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 ENPP2Q13822 863 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 SNCBQ16143 134 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 ISXQ2M1V0 245 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 AARS2Q5JTZ9 985 aaKnown RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 METTL21CQ5VZV1 264 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 CAPRIN2Q6IMN6 1127 aaKnown RBP8.1□□□□□ -1.11
CD44-205ENST00000352818 RETSATQ6NUM9 610 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 EPGNQ6UW88 154 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 NAPRTQ6XQN6 538 aa8.1□□□□□ -1.11
CD44-205ENST00000352818 MAMDC2Q7Z304 686 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms