RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 IDH3AP50213 366 aa18.35■□□□□ 0.53
UBE3C-201ENST00000348165 LAPTM5Q13571 262 aa18.35■□□□□ 0.53
UBE3C-201ENST00000348165 PDGFRLQ15198 375 aa18.35■□□□□ 0.53
UBE3C-201ENST00000348165 LYSMD3Q7Z3D4 306 aa18.35■□□□□ 0.53
UBE3C-201ENST00000348165 FAM156AQ8NDB6 213 aa18.35■□□□□ 0.53
UBE3C-201ENST00000348165 ZHX1-C8orf76Q96EF9 292 aa18.35■□□□□ 0.53
UBE3C-201ENST00000348165 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
UBE3C-201ENST00000348165 POLMQ9NP87 494 aaPredicted RBP18.35■□□□□ 0.53
UBE3C-201ENST00000348165 GATMP50440 423 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 LDLRAP1Q5SW96 308 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ERICH5Q6P6B1 374 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 KLHL17Q6TDP4 642 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 GDPD4Q6W3E5 623 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 PIH1D2Q8WWB5 315 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 SRMSQ9H3Y6 488 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 BTBD3Q9Y2F9 522 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 IFT172Q9UG01 1749 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 CLDN4O14493 209 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 SAGP10523 405 aaPredicted RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ACTR1BP42025 376 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 YAP1P46937 504 aaKnown RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ARPC4P59998 168 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 SRP54P61011 504 aaKnown RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ACTR1AP61163 376 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 GCNT6Q5T4J0 391 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 REP15Q6BDI9 236 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 GLIS1Q8NBF1 620 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 POP5Q969H6 163 aaKnown RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ARHGEF3Q9NR81 526 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 SUCOQ9UBS9 1254 aaKnown RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ZNF155Q12901 538 aaPredicted RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 GPR17Q13304 367 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ZNF730Q6ZMV8 503 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 C11orf65Q8NCR3 313 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 OR10A6Q8NH74 314 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 WFIKKN2Q8TEU8 576 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 RBM18Q96H35 190 aaKnown RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 PCYT2Q99447 389 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 SLC38A3Q99624 504 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ALG2Q9H553 416 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 ZDHHC18Q9NUE0 388 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 WNT6Q9Y6F9 365 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 CDK9P50750 372 aaKnown RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 RIOK2Q9BVS4 552 aaKnown RBP18.34■□□□□ 0.53
UBE3C-201ENST00000348165 C1orf109Q9NX04 203 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 CMTM6Q9NX76 183 aa18.34■□□□□ 0.53
UBE3C-201ENST00000348165 CCR3P51677 355 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 RGS8P57771 180 aaPredicted RBP18.33■□□□□ 0.53
UBE3C-201ENST00000348165 NDUFAF6Q330K2 333 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 FAM174BQ3ZCQ3 159 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 SIRPB2Q5JXA9 342 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 CADM2Q8N3J6 435 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 KAT2AQ92830 837 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 TMEM175Q9BSA9 504 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 CLK4Q9HAZ1 481 aaKnown RBP18.33■□□□□ 0.53
UBE3C-201ENST00000348165 PRDM8Q9NQV8 689 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 MFHAS1Q9Y4C4 1052 aa18.33■□□□□ 0.53
UBE3C-201ENST00000348165 A0A0G2JN53 185 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.52
UBE3C-201ENST00000348165 SIX3O95343 332 aaPredicted RBP18.33■□□□□ 0.52
UBE3C-201ENST00000348165 SEC24AO95486 1093 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 ACP5P13686 325 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 MYBPC1Q00872 1141 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 PITRM1Q5JRX3 1037 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 BEND5Q7L4P6 421 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 HMGB4Q8WW32 186 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 ZNF599Q96NL3 588 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 TRPS1Q9UHF7 1281 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 RAPGEFL1Q9UHV5 662 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 CXorf49A8MYA2 514 aaPredicted RBP18.33■□□□□ 0.52
UBE3C-201ENST00000348165 PI15O43692 258 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 FSHRP23945 695 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 OLIG2Q13516 323 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 RAPSNQ13702 412 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 LPIN1Q14693 890 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 NRSN1Q8IZ57 195 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 ZNF461Q8TAF7 563 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 ZNF354BQ96LW1 612 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 MBD2Q9UBB5 411 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 DPPA5A6NC42 116 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 SLC34A3Q8N130 599 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 OR2AP1Q8NGE2 309 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 METTL21AQ8WXB1 218 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 C5orf34Q96MH7 638 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 CDK15Q96Q40 435 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 MRTO4Q9UKD2 239 aaKnown RBP18.33■□□□□ 0.52
UBE3C-201ENST00000348165 SCML2Q9UQR0 700 aa18.33■□□□□ 0.52
UBE3C-201ENST00000348165 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 NPHS1O60500 1241 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 FAM163BP0C2L3 166 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 HCAR3P49019 387 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 LGALS3BPQ08380 585 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 RTL4Q6ZR62 310 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 LRRC15Q8TF66 581 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 SMOC2Q9H3U7 446 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 CRTAC1Q9NQ79 661 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 TDP1Q9NUW8 608 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 KCPQ6ZWJ8 1503 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 ROBO1Q9Y6N7 1651 aa18.32■□□□□ 0.52
UBE3C-201ENST00000348165 RHAGQ02094 409 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms