RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CATSPER2Q96P56 530 aa9.1□□□□□ -0.95
ATG4A-202ENST00000345734 C19orf43Q9BQ61 176 aa9.1□□□□□ -0.95
ATG4A-202ENST00000345734 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.1□□□□□ -0.95
ATG4A-202ENST00000345734 GNPTGQ9UJJ9 305 aa9.1□□□□□ -0.95
ATG4A-202ENST00000345734 TRAF6Q9Y4K3 522 aa9.1□□□□□ -0.95
ATG4A-202ENST00000345734 LOC100653049A0A140TA62 436 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 A0A1B0GTL3 188 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 KRT34O76011 436 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 CDK14O94921 469 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 SLC25A14O95258 325 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-202ENST00000345734 PPARGP37231 505 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-202ENST00000345734 SPINT3P49223 89 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 GALNT1Q10472 559 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-202ENST00000345734 RIPK1Q13546 671 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 LRRC23Q53EV4 343 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-202ENST00000345734 METTL21CQ5VZV1 264 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 TANGO2Q6ICL3 276 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 UGT3A1Q6NUS8 523 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 HSD11B1LQ7Z5J1 315 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 TRPC4APQ8TEL6 797 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 ESAMQ96AP7 390 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 TTC1Q99614 292 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 CCDC28BQ9BUN5 200 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 PCDH12Q9NPG4 1184 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 ELOVL2Q9NXB9 296 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 IL36AQ9UHA7 158 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 TMPRSS11EQ9UL52 423 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 ASB1Q9Y576 335 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 ATG2BQ96BY7 2078 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 PLXNA2O75051 1894 aa9.09□□□□□ -0.95
ATG4A-202ENST00000345734 COL4A3Q01955 1670 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 ANTXRLA6NF34 631 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 TRPC5OSA6NMA1 111 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SYCE1LA8MT33 242 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 AGAP14A8MT82 685 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SRPRAP08240 638 aaKnown RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 HLA-EP13747 358 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 FCARP24071 287 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 CPOXP36551 454 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 METAP1P53582 386 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 FOXA1P55317 472 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 POLR2LP62875 67 aaKnown RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MXRA7P84157 204 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SLC25A3Q00325 362 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 B4GALNT1Q00973 533 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 ARHGEF7Q14155 803 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 PPP1R3AQ16821 1122 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 GPR33Q49SQ1 333 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 ACSBG2Q5FVE4 666 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 LYPLAL1Q5VWZ2 237 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 BRAT1Q6PJG6 821 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MACC1Q6ZN28 852 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 GPSM1Q86YR5 675 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 TMPRSS6Q8IU80 811 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 WFIKKN2Q8TEU8 576 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SCAMP4Q969E2 229 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MCUR1Q96AQ8 359 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MAELQ96JY0 434 aaKnown RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 CLPTM1LQ96KA5 538 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 LENG8Q96PV6 779 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 KCNA7Q96RP8 456 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 ARPC5LQ9BPX5 153 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 FAM83CQ9BQN1 747 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 TRMOQ9BU70 441 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 DENND2DQ9H6A0 471 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 ZNF385DQ9H6B1 395 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MEAF6Q9HAF1 191 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MID1IP1Q9NPA3 183 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 HPS4Q9NQG7 708 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 KLF15Q9UIH9 416 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 MBD1Q9UIS9 605 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 PPT2Q9UMR5 302 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 PLA2G4CQ9UP65 541 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SLC27A6Q9Y2P4 619 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 KIAA1549LQ6ZVL6 1849 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 A0A1W2PQ67 120 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 TSPAN11A1L157 253 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 UPK3BL1B0FP48 263 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 UPK3BL2E5RIL1 263 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 KLK8O60259 260 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 NFATC1O95644 943 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 ASLP04424 464 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 COX4I1P13073 169 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 GM2AP17900 193 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 PIK3R1P27986 724 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 VIPR1P32241 457 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 PGM1P36871 562 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 COPAP53621 1224 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 CLCQ05315 142 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 C18orf21Q32NC0 220 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 UGT3A2Q3SY77 523 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 CYHR1Q6ZMK1 362 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 GPR149Q86SP6 731 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 LSM14AQ8ND56 463 aaKnown RBP9.08□□□□□ -0.96
ATG4A-202ENST00000345734 STK35Q8TDR2 534 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 STON2Q8WXE9 905 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 ERLEC1Q96DZ1 483 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 FAR2Q96K12 515 aa9.08□□□□□ -0.96
ATG4A-202ENST00000345734 LMAN2LQ9H0V9 348 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms