RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 AREL1O15033 823 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 SEC24DO94855 1032 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-202ENST00000343599 CRTAMO95727 393 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 HOXB1P14653 301 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-202ENST00000343599 GLB1P16278 677 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 DRD3P35462 400 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 TIE1P35590 1138 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 HADHAP40939 763 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 VAMP7P51809 220 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 KLRB1Q12918 225 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 MLC1Q15049 377 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 STK11Q15831 433 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 TRIM16LQ309B1 348 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 PAOXQ6QHF9 649 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 TMEM126BQ8IUX1 230 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 SLITRK4Q8IW52 837 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 TMEM151BQ8IW70 566 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 TEX19Q8NA77 164 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 GALNT6Q8NCL4 622 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 FBXL13Q8NEE6 735 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 HASPINQ8TF76 798 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 THAP4Q8WY91 577 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 JADE3Q92613 823 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 TBC1D20Q96BZ9 403 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 ISOC1Q96CN7 298 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 ECHDC3Q96DC8 303 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 LYSMD1Q96S90 227 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 MTMR12Q9C0I1 747 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 HEY2Q9UBP5 337 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 PCYOX1Q9UHG3 505 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 GRID1Q9ULK0 1009 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 VANGL2Q9ULK5 521 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 RAXQ9Y2V3 346 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 MTO1Q9Y2Z2 717 aaKnown RBP7.22□□□□□ -1.25
ZNF540-202ENST00000343599 SPAARA0A1B0GVQ0 90 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 CAPN14A8MX76 684 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 FGF10O15520 208 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-202ENST00000343599 ATXN1LP0C7T5 689 aaKnown RBP7.22□□□□□ -1.25
ZNF540-202ENST00000343599 CCDC130P13994 396 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 PRKACAP17612 351 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 TRIM23P36406 574 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 EPHB1P54762 984 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 RALGDSQ12967 914 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 IL11RAQ14626 422 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 BRAT1Q6PJG6 821 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 SUSD1Q6UWL2 747 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 GCNT7Q6ZNI0 430 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 RFX8Q6ZV50 586 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 GSDMBQ8TAX9 411 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 ZNF75CPQ92670 426 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-202ENST00000343599 MTBPQ96DY7 904 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 METTL2AQ96IZ6 378 aaKnown RBP7.22□□□□□ -1.25
ZNF540-202ENST00000343599 C17orf62Q9BQA9 187 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 DHRS4Q9BTZ2 278 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 PACSIN1Q9BY11 444 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 MAP10Q9P2G4 905 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 RCOR3Q9P2K3 495 aaPredicted RBP7.22□□□□□ -1.25
ZNF540-202ENST00000343599 DNAJC12Q9UKB3 198 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 LRRK1Q38SD2 2015 aa7.22□□□□□ -1.25
ZNF540-202ENST00000343599 ARPC4-TTLL3A0A0A6YYG9 625 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 A0A0A6YYK5 440 aaPredicted RBP7.21□□□□□ -1.25
ZNF540-202ENST00000343599 A6NL46 340 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 B2RBV5 119 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 TMEM127O75204 238 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 MTA2O94776 668 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 MYO1DO94832 1006 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 BMP10O95393 424 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 FGGP02679 453 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 WNT1P04628 370 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 KRT13P13646 458 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 BTF3P20290 206 aaKnown RBP7.21□□□□□ -1.25
ZNF540-202ENST00000343599 PSMA3P25788 255 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 PKLRP30613 574 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 CBX5P45973 191 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 BMXP51813 675 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 DCDC1P59894 354 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 B4GALNT1Q00973 533 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 STAT4Q14765 748 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 DDR2Q16832 855 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 KCTD19Q17RG1 926 aaPredicted RBP7.21□□□□□ -1.25
ZNF540-202ENST00000343599 LRRC36Q1X8D7 754 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 KCNT1Q5JUK3 1230 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 FAM122CQ6P4D5 195 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 TIPARPQ7Z3E1 657 aaKnown RBP7.21□□□□□ -1.25
ZNF540-202ENST00000343599 NT5DC3Q86UY8 548 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 SYCE1Q8N0S2 351 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 PPM1KQ8N3J5 372 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 TSPAN14Q8NG11 270 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 TMIGD2Q96BF3 282 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 DCUN1D1Q96GG9 259 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 VCPIP1Q96JH7 1222 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 ALPK1Q96QP1 1244 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 COQ7Q99807 217 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 CDC42EP4Q9H3Q1 356 aaKnown RBP7.21□□□□□ -1.25
ZNF540-202ENST00000343599 NPHS2Q9NP85 383 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 RIC8BQ9NVN3 520 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 TMEM248Q9NWD8 314 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 DCAF16Q9NXF7 216 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 DTNAQ9Y4J8 743 aa7.21□□□□□ -1.25
ZNF540-202ENST00000343599 FOXO6A8MYZ6 492 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms