RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 RIOK2Q9BVS4 552 aaKnown RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 PNO1Q9NRX1 252 aaKnown RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 TDP1Q9NUW8 608 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 FBXL12Q9NXK8 326 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 UNCXA6NJT0 531 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ENPEPQ07075 957 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 HKDC1Q2TB90 917 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ZNF776Q68DI1 518 aaPredicted RBP14.79□□□□□ -0.04
UBE3B-202ENST00000342494 ADGRG6Q86SQ4 1221 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 SPPL2CQ8IUH8 684 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 FUKQ8N0W3 1084 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 CRELD1Q96HD1 420 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 HIST1H2AAQ96QV6 131 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 CCSER2Q9H7U1 834 aa14.79□□□□□ -0.04
UBE3B-202ENST00000342494 CHST10O43529 356 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ATP5A1P25705 553 aaKnown RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 RIPK1Q13546 671 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 SH3D19Q5HYK7 790 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 FSTL4Q6MZW2 842 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 MPP5Q8N3R9 675 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 TMEM145Q8NBT3 493 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 TTLQ8NG68 377 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ZBED6CLQ96FA7 236 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 NR2E1Q9Y466 385 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 EDDM13A0A1B0GTR0 161 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 CCDC182A6NF36 153 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 FAM25EA8MYX2 175 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 PSIP1O75475 530 aaKnown RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 CYB5AP00167 134 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 HOXB2P14652 356 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 MSX2P35548 267 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ARHGDIBP52566 201 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 GPR33Q49SQ1 333 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 TMEM63BQ5T3F8 832 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 FRRS1Q6ZNA5 592 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 IRF2BP1Q8IU81 584 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 OR52J3Q8NH60 311 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 NPLOC4Q8TAT6 608 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ADAP2Q9NPF8 381 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 RUVBL1Q9Y265 456 aaKnown RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 TPD52L2O43399 206 aaKnown RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 TRAP1Q12931 704 aaKnown RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 MTX3Q5HYI7 312 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 GRASPQ7Z6J2 395 aaPredicted RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ANKRD46Q86W74 232 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 IRF7Q92985 503 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 OSBPL2Q9H1P3 480 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ARHGEF28Q8N1W1 1705 aaKnown RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ILVBLA1L0T0 632 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 MAGEB17A8MXT2 336 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 RGS20O76081 388 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 PRKCHP24723 683 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 POU5F1Q01860 360 aaKnown RBP14.78□□□□□ -0.04
UBE3B-202ENST00000342494 PLGLB1Q02325 96 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 OLFML2AQ68BL7 652 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ABHD13Q7L211 337 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ZNF366Q8N895 744 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 PCDH19Q8TAB3 1148 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 ZNF599Q96NL3 588 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 C1QTNF1Q9BXJ1 281 aa14.78□□□□□ -0.04
UBE3B-202ENST00000342494 A0A1W2PQ45 241 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-202ENST00000342494 A0A1W2PQY0 241 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 TCRBV7S2A1N4TA0A589 114 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 SLC7A1P30825 629 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 GNALP38405 381 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 KHKP50053 298 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 CCR8P51685 355 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 QPRTQ15274 297 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 ANKRD22Q5VYY1 191 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 TCEAL6Q6IPX3 200 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 RASSF6Q6ZTQ3 369 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 CYP2U1Q7Z449 544 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 OR5T3Q8NGG3 340 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 RELTQ969Z4 430 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 NTPCRQ9BSD7 190 aaKnown RBP14.77□□□□□ -0.04
UBE3B-202ENST00000342494 C1orf109Q9NX04 203 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 WNT6Q9Y6F9 365 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 PLIN4Q96Q06 1357 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 FGF18O76093 207 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 ZNF823P16415 610 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 PCSK2P16519 638 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 IGFBP5P24593 272 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 EIF2B2P49770 351 aaKnown RBP14.77□□□□□ -0.04
UBE3B-202ENST00000342494 SMCO1Q147U7 214 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 PRKD1Q15139 912 aaPredicted RBP14.77□□□□□ -0.04
UBE3B-202ENST00000342494 BRAT1Q6PJG6 821 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 RASGEF1AQ8N9B8 481 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 AVL9Q8NBF6 648 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 ESAMQ96AP7 390 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 GSDMCQ9BYG8 508 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 DTLQ9NZJ0 730 aa14.77□□□□□ -0.04
UBE3B-202ENST00000342494 GABRDO14764 452 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 NOL4O94818 638 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 ZBTB11O95625 1053 aaPredicted RBP14.77□□□□□ -0.05
UBE3B-202ENST00000342494 DRD4P21917 467 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 PTDSS1P48651 473 aaKnown RBP14.77□□□□□ -0.05
UBE3B-202ENST00000342494 OLR1P78380 273 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 PJA1Q8NG27 643 aa14.77□□□□□ -0.05
UBE3B-202ENST00000342494 KCTD13Q8WZ19 329 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms