RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SEMG2Q02383 582 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 FOXM1Q08050 763 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 CDH18Q13634 790 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 TEAD2Q15562 447 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 NANOGP8Q6NSW7 305 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 SERPINA9Q86WD7 417 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 TRIML2Q8N7C3 387 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 ZNF707Q96C28 371 aaPredicted RBP16.05■□□□□ 0.16
LITAF-201ENST00000339430 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 MYO19Q96H55 970 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 LMAN2LQ9H0V9 348 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 NANOGQ9H9S0 305 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 OLAHQ9NV23 265 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 EVLQ9UI08 416 aaPredicted RBP16.05■□□□□ 0.16
LITAF-201ENST00000339430 OAZ3Q9UMX2 235 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 DHRS7Q9Y394 339 aa16.05■□□□□ 0.16
LITAF-201ENST00000339430 RNF103-CHMP3A0A140T963 221 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 H3BSA7 217 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 OR7A17O14581 309 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 SMAD6O43541 496 aaKnown RBP16.04■□□□□ 0.16
LITAF-201ENST00000339430 FZD6O60353 706 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 MOSPD3O75425 235 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 BMP8BP34820 402 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 PIK3CGP48736 1102 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 HSPA7P48741 367 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 NR1H2P55055 460 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 CDH15P55291 814 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 NR6A1Q15406 480 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 DUSP6Q16828 381 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 PDCD4Q53EL6 469 aaKnown RBP16.04■□□□□ 0.16
LITAF-201ENST00000339430 ARMC12Q5T9G4 340 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 SBSNQ6UWP8 590 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 RALGPS2Q86X27 583 aaPredicted RBP16.04■□□□□ 0.16
LITAF-201ENST00000339430 APCDD1Q8J025 514 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 SEPHS2Q99611 448 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 APOL5Q9BWW9 433 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 NSUN3Q9H649 340 aaKnown RBP16.04■□□□□ 0.16
LITAF-201ENST00000339430 SMOXQ9NWM0 555 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 NUDT4Q9NZJ9 180 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 MYRFQ9Y2G1 1151 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 PRSS21Q9Y6M0 314 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 H3BNH8 94 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 DLGAP1O14490 977 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 GREM1O60565 184 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 TRIM16O95361 564 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 G6PDP11413 515 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 UGT1A1P22309 533 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 UGT1A4P22310 534 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 UGT1A3P35503 534 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 UGT1A5P35504 534 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 HMGCLP35914 325 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 SLC7A9P82251 487 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 CREB5Q02930 508 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 GTF2H2Q13888 395 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 RBBP5Q15291 538 aaKnown RBP16.04■□□□□ 0.16
LITAF-201ENST00000339430 GTF2H2CQ6P1K8 395 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 VN1R2Q8NFZ6 395 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 DDI1Q8WTU0 396 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 TMIGD2Q96BF3 282 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 RMND5BQ96G75 393 aaPredicted RBP16.04■□□□□ 0.16
LITAF-201ENST00000339430 PPM1MQ96MI6 270 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 CLPBQ9H078 707 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 IGFLR1Q9H665 355 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 ASB8Q9H765 288 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 CFAP97Q9P2B7 532 aa16.04■□□□□ 0.16
LITAF-201ENST00000339430 POLR3HQ9Y535 204 aaPredicted RBP16.04■□□□□ 0.16
LITAF-201ENST00000339430 C1orf232A0A0U1RR37 186 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 FAM234BA2RU67 622 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 FFAR2O15552 330 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 SEC24DO94855 1032 aaPredicted RBP16.03■□□□□ 0.16
LITAF-201ENST00000339430 FGF19O95750 216 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 CD9P21926 228 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 GDF5P43026 501 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 DGKQP52824 942 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 DYNC1I2Q13409 638 aaKnown RBP16.03■□□□□ 0.16
LITAF-201ENST00000339430 ABRAXAS2Q15018 415 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 INO80DQ53TQ3 878 aaPredicted RBP16.03■□□□□ 0.16
LITAF-201ENST00000339430 IRAK1BP1Q5VVH5 260 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 ELMSAN1Q6PJG2 1045 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 TMC5Q6UXY8 1006 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 STK40Q8N2I9 435 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 TSPEARQ8WU66 669 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 TFAP2CQ92754 450 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 ANKRD60Q9BZ19 345 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 IPPKQ9H8X2 491 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 PFDN4Q9NQP4 134 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 PNPLA3Q9NST1 481 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 DDX18Q9NVP1 670 aaKnown RBP16.03■□□□□ 0.16
LITAF-201ENST00000339430 ZIM2Q9NZV7 527 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 NOTCH4Q99466 2003 aa16.03■□□□□ 0.16
LITAF-201ENST00000339430 TCRBV5S2A0A599 114 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 GAPDHSO14556 408 aaPredicted RBP16.02■□□□□ 0.16
LITAF-201ENST00000339430 RSL1D1O76021 490 aaKnown RBP16.02■□□□□ 0.16
LITAF-201ENST00000339430 PGLSO95336 258 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 CLIC3O95833 236 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 S100BP04271 92 aaPredicted RBP16.02■□□□□ 0.16
LITAF-201ENST00000339430 CCT8P50990 548 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 ADARP55265 1226 aaKnown RBP16.02■□□□□ 0.16
LITAF-201ENST00000339430 NAA20P61599 178 aa16.02■□□□□ 0.16
LITAF-201ENST00000339430 GRIK2Q13002 908 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms