RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TTC23LQ6PF05 361 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 NAPRTQ6XQN6 538 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 EFL1Q7Z2Z2 1120 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 ZC3HC1Q86WB0 502 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 GSPT2Q8IYD1 628 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 LILRA3Q8N6C8 439 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 LKAAEAR1Q8TD35 194 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC37A2Q8TED4 501 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 PATE1Q8WXA2 126 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 TFGQ92734 400 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 TSPAN17Q96FV3 270 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 ELMO2Q96JJ3 720 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 C12orf66Q96MD2 445 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 FOPNLQ96NB1 174 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 FERD3LQ96RJ6 166 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 NDNQ99608 321 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC38A3Q99624 504 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 TXLNGYQ9BZA5 131 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 ABCG4Q9H172 646 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 OR52A5Q9H2C5 316 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 MVB12BQ9H7P6 319 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 SCHIP1Q9P0W5 487 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 ZNF624Q9P2J8 865 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC17A6Q9P2U8 582 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 TRMT6Q9UJA5 497 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 PCDHGA1Q9Y5H4 931 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 PSAT1Q9Y617 370 aa11.65□□□□□ -0.54
SPTLC1-202ENST00000337841 CABIN1Q9Y6J0 2220 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 ADAMTS9Q9P2N4 1935 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 SPAARA0A1B0GVQ0 90 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 FAM95CA0A1B0GW59 222 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 OR52A4PA6NMU1 304 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 C1QAP02745 245 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 RPN2P04844 631 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 GP1BAP07359 652 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 INHBAP08476 426 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 CBSLP0DN79 551 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 MTHFD1P11586 935 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 SAT1P21673 171 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 ATP5DP30049 168 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 CBSP35520 551 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 ABCG1P45844 678 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 GPR3P46089 330 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 ID4P47928 161 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 FASLGP48023 281 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 RGS4P49798 205 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 CLCN7P51798 805 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 POU4F1Q01851 419 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 ABRQ12979 859 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 SLC29A2Q14542 456 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 MAP9Q49MG5 647 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 CCDC157Q569K6 752 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 LGSNQ5TDP6 509 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 GUSBP11Q6P575 273 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 PDZD3Q86UT5 571 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 SFTPA2Q8IWL1 248 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 SIDT2Q8NBJ9 832 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 UHMK1Q8TAS1 419 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 IFI44Q8TCB0 444 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 SKA2Q8WVK7 121 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 UBLCP1Q8WVY7 318 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 FAM136AQ96C01 138 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 MRRFQ96E11 262 aaKnown RBP11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 ATXN7L3BQ96GX2 97 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 GPR21Q99679 349 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 RBBP8Q99708 897 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 UCK1Q9HA47 277 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 SYTL2Q9HCH5 934 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 POT1Q9NUX5 634 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 GALPQ9UBC7 116 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 RAB21Q9UL25 225 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 RNF215Q9Y6U7 377 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 SCN8AQ9UQD0 1980 aa11.64□□□□□ -0.55
SPTLC1-202ENST00000337841 GVINP1Q7Z2Y8 2422 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 LY6G6EA0A0G2JKS1 128 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 POC1B-GALNT4F8VUJ3 575 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 EIF3FO00303 357 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 PPM1DO15297 605 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 KDM1AO60341 852 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 RFPL3O75679 317 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 ENO3P13929 434 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 ACADLP28330 430 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 ALDH4A1P30038 563 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 MAPK9P45984 424 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 PPM1FP49593 454 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 ACADVLP49748 655 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 SERPINB9P50453 376 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 CDKN2DP55273 166 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 IL2P60568 153 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 UBE2IP63279 158 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 USP10Q14694 798 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 UAP1Q16222 522 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 ACSBG2Q5FVE4 666 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 RBM20Q5T481 1227 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 LRRC8EQ6NSJ5 796 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 TMEM26Q6ZUK4 368 aa11.63□□□□□ -0.55
SPTLC1-202ENST00000337841 NEK10Q6ZWH5 1172 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms