RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 MPP4Q96JB8 637 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 TRMT61BQ9BVS5 477 aaKnown RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 CST11Q9H112 138 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 POLR3HQ9Y535 204 aaPredicted RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 HEATR1Q9H583 2144 aaKnown RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 PLGP00747 810 aaPredicted RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 MAXP61244 160 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 RNASEH2BQ5TBB1 312 aaKnown RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 ZNF776Q68DI1 518 aaPredicted RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 PYHIN1Q6K0P9 492 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 OXR1Q8N573 874 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 NMD3Q96D46 503 aaKnown RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 SUSD3Q96L08 255 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 DGAT2Q96PD7 388 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 TUBGCP5Q96RT8 1024 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 UNC93B1Q9H1C4 597 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 C5P01031 1676 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 ZNF37AP17032 561 aaPredicted RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 OXTRP30559 389 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 ACTR1BP42025 376 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 UBXN2BQ14CS0 331 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 NRF1Q16656 503 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 DRICH1Q6PGQ1 229 aaPredicted RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 RASGEF1CQ8N431 466 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 PDPRQ8NCN5 879 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 OR2T34Q8NGX1 318 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 OR2T3Q8NH03 318 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 CEP295NLQ96MC4 621 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 MCMBPQ9BTE3 642 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 DGCR6LQ9BY27 220 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 ACSL5Q9ULC5 683 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 SCML2Q9UQR0 700 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 CTBP1Q13363 440 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 NPNTQ6UXI9 565 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 FRRS1Q6ZNA5 592 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 IRF2BP2Q7Z5L9 587 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 LRRTM4Q86VH4 590 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 WDR26Q9H7D7 661 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 ZNF318Q5VUA4 2279 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 KIF13BQ9NQT8 1826 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 GABRDO14764 452 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 OR1F1O43749 312 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 STBD1O95210 358 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 NAA30Q147X3 362 aaPredicted RBP12.1□□□□□ -0.47
FN1-202ENST00000336916 FAM124AQ86V42 546 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 EXOC2Q96KP1 924 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 USP29Q9HBJ7 922 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 C15orf41Q9Y2V0 281 aa12.1□□□□□ -0.47
FN1-202ENST00000336916 PLIN3O60664 434 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 CTSKP43235 329 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 GDPD4Q6W3E5 623 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 ZCCHC23Q6ZST2 131 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 FARSBQ9NSD9 589 aaKnown RBP12.09□□□□□ -0.47
FN1-202ENST00000336916 TMEM17Q86X19 198 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 TIGARQ9NQ88 270 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 PKD1L3Q7Z443 1732 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 LINC00854A0A1B0GVQ3 168 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 SNX3O60493 162 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 TSC22D2O75157 780 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 PFKLP17858 780 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 FGFR3P22607 806 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 CDKN2BP42772 138 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 NAE1Q13564 534 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 MEIOBQ8N635 442 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 DHRS7Q9Y394 339 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 ZFP37Q9Y6Q3 630 aaPredicted RBP12.09□□□□□ -0.47
FN1-202ENST00000336916 PDPK1O15530 556 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 SH3BGRLO75368 114 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 FABP3P05413 133 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 OLFML2AQ68BL7 652 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 HID1Q8IV36 788 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 ANKFN1Q8N957 763 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 TSEN15Q8WW01 171 aaKnown RBP12.09□□□□□ -0.47
FN1-202ENST00000336916 LRIG1Q96JA1 1093 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 NECTIN4Q96NY8 510 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 SERTAD3Q9UJW9 196 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 METTL21EPA6NDL7 271 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 SLC7A1P30825 629 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 SUOXP51687 545 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 RINLQ6ZS11 566 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 PGAM4Q8N0Y7 254 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 PRELID2Q8N945 189 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 SNX33Q8WV41 574 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 ARNTL2Q8WYA1 636 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 RAB7BQ96AH8 199 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 NEDD4LQ96PU5 975 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 TBL1XR1Q9BZK7 514 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 TRPV5Q9NQA5 729 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 RAB26Q9ULW5 256 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 MEMO1Q9Y316 297 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 CSTF2P33240 577 aaKnown RBP eCLIP12.09□□□□□ -0.473e-12■■■□□ 18.4
FN1-202ENST00000336916 CRADDP78560 199 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
FN1-202ENST00000336916 CBX3Q13185 183 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 SNAPC1Q16533 368 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 MBOAT1Q6ZNC8 495 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 EFCAB11Q9BUY7 163 aa12.09□□□□□ -0.47
FN1-202ENST00000336916 MOCS1Q9NZB8 636 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms