RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 FDXRP22570 491 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 CD40LGP29965 261 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 TGFBR1P36897 503 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 ALDH7A1P49419 539 aaKnown RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 RENBPP51606 427 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 AFF1P51825 1210 aaKnown RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 PPP5CP53041 499 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 RAPSNQ13702 412 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 RSBN1Q5VWQ0 802 aaPredicted RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 RGMBQ6NW40 437 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 TAS2R42Q7RTR8 314 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 EFL1Q7Z2Z2 1120 aaKnown RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 ZNF540Q8NDQ6 660 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 BTN2A3PQ96KV6 586 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 TPRKBQ9Y3C4 175 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 MITFO75030 526 aaPredicted RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 KATNA1O75449 491 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 DNAJB5O75953 348 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 KRT8P05787 483 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 G6PDP11413 515 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 GGT1P19440 569 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 PCMT1P22061 227 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 COPZ1P61923 177 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 MAP2K5Q13163 448 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 NKG7Q16617 165 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 AAK1Q2M2I8 961 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 KDELC1Q6UW63 502 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 LGALS12Q96DT0 336 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 TP63Q9H3D4 680 aaPredicted RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 TFB2MQ9H5Q4 396 aaKnown RBP13.52□□□□□ -0.24
SYNE3-201ENST00000334258 MARCH7Q9H992 704 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 FBXO8Q9NRD0 319 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 CD274Q9NZQ7 290 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 ZIM2Q9NZV7 527 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 SLCO3A1Q9UIG8 710 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 ARL5AQ9Y689 179 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 PMF1-BGLAPU3KQ54 211 aa13.52□□□□□ -0.24
SYNE3-201ENST00000334258 PRSS56P0CW18 603 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 PPP2R2BQ00005 443 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 SLC10A7Q0GE19 358 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 GRIK2Q13002 908 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 GTF2H3Q13889 308 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 LAIR2Q6ISS4 152 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 IL27RAQ6UWB1 636 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 GPRIN3Q6ZVF9 776 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 DET1Q7L5Y6 550 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 ZFAND4Q86XD8 727 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 FAM20CQ8IXL6 584 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 SYTL1Q8IYJ3 562 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 SVOPLQ8N434 492 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 RHOXF1Q8NHV9 184 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 METTL6Q8TCB7 284 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 SP110Q9HB58 689 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 PARVBQ9HBI1 364 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 SYTL2Q9HCH5 934 aa13.52□□□□□ -0.25
SYNE3-201ENST00000334258 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
SYNE3-201ENST00000334258 NPEPPSL1A6NEC2 478 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 RFPL2O75678 378 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 PRSS23O95084 383 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 CCDC159P0C7I6 412 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 RAD51Q06609 339 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 PAN2Q504Q3 1202 aaKnown RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 SIRPB2Q5JXA9 342 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 RFPL4BQ6ZWI9 263 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 NECAB2Q7Z6G3 386 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 KLHDC8BQ8IXV7 354 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 GAD1Q99259 594 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 SMPD4Q9NXE4 827 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 MYO1GB0I1T2 1018 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 J3KR12 359 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 FGF10O15520 208 aaPredicted RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 NUAK1O60285 661 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 KERAO60938 352 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 CYP11A1P05108 521 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 ALOX12P18054 663 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 GGT5P36269 586 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 DCTP40126 519 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 ZFP36L2P47974 494 aaKnown RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 CLCA4Q14CN2 919 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 TWF2Q6IBS0 349 aaKnown RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 GCNT7Q6ZNI0 430 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 HEATR4Q86WZ0 1026 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 IFNL1Q8IU54 200 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 OR56A4Q8NGH8 313 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 OR13C4Q8NGS5 318 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 RHEBL1Q8TAI7 183 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 KIAA1191Q96A73 305 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 ZNF583Q96ND8 569 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 AGO3Q9H9G7 860 aaKnown RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 CPNE5Q9HCH3 593 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 DDX28Q9NUL7 540 aaKnown RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 TAS2R13Q9NYV9 303 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 VAPAQ9P0L0 249 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 EIF2B4Q9UI10 523 aaKnown RBP13.51□□□□□ -0.25
SYNE3-201ENST00000334258 MLYCDO95822 493 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 CD36P16671 472 aa13.51□□□□□ -0.25
SYNE3-201ENST00000334258 CACNB2Q08289 660 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms