RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 ATP6V1B1P15313 513 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 PSMC3P17980 439 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 PSMA4P25789 261 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 RPL38P63173 70 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 PLIN5Q00G26 463 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 CYP51A1Q16850 503 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 CNPY1Q3B7I2 92 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 LILRA6Q6PI73 481 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 METTL3Q86U44 580 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 CHERPQ8IWX8 916 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 ADGRG5Q8IZF4 528 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 CBARPQ8N350 705 aaPredicted RBP14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 KREMEN2Q8NCW0 462 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 TCEAL4Q96EI5 215 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 LYSMD1Q96S90 227 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 ASAH2Q9NR71 780 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 MBD1Q9UIS9 605 aaPredicted RBP14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 TRIM43BA6NCK2 446 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 PDLIM1O00151 329 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 TNFAIP8O95379 198 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 FESP07332 822 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 NELFEP18615 380 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 NSG1P42857 185 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 HMGCS1Q01581 520 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 ARHGEF7Q14155 803 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 SGO1Q5FBB7 561 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 C1orf53Q5VUE5 145 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 USP45Q70EL2 814 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 AHI1Q8N157 1196 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 ANKFN1Q8N957 763 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 TRIM43Q96BQ3 446 aaPredicted RBP14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 ECHDC3Q96DC8 303 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 PPM1MQ96MI6 270 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 KLQ9UEF7 1012 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 CD84Q9UIB8 345 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 HS3ST2Q9Y278 367 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 RNF11Q9Y3C5 154 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 CCL27Q9Y4X3 112 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 PLXNB3Q9ULL4 1909 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 CDH23Q9H251 3354 aa14.59□□□□□ -0.07
CLCNKA-201ENST00000331433 ARHGAP10A1A4S6 786 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 AGAP14A8MT82 685 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 NEDD8-MDP1E9PL57 170 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 ANKRD28O15084 1053 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 PABPC4LP0CB38 370 aaKnown RBP14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 SLC2A4P14672 509 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 PTGR1Q14914 329 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 LRRC26Q2I0M4 334 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 IRAK1BP1Q5VVH5 260 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 SULT1C3Q6IMI6 304 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 Q6ZVU0 165 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 DET1Q7L5Y6 550 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 RALGPS2Q86X27 583 aaPredicted RBP14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 EPHX4Q8IUS5 362 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 ELMOD1Q8N336 334 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 KLHL23Q8NBE8 558 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 CHST14Q8NCH0 376 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 SPDYE1Q8NFV5 336 aaPredicted RBP14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 COPS8Q99627 209 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 C19orf43Q9BQ61 176 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 CRISPLD2Q9H0B8 497 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 PAPOLBQ9NRJ5 636 aaKnown RBP14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 AGPAT4Q9NRZ5 378 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 SAGE1Q9NXZ1 904 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 V9GYQ6 96 aa14.58□□□□□ -0.07
CLCNKA-201ENST00000331433 H0YJX3 145 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 HNRNPRO43390 633 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 CLPTM1O96005 669 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 TFAP2AP05549 437 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 ETS2P15036 469 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 IL10P22301 178 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 CCR7P32248 378 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 CREMQ03060 361 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 SELPLGQ14242 412 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 DLEU7Q6UYE1 221 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 CCDC149Q6ZUS6 474 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 OSBPL11Q9BXB4 747 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 ZNF696Q9H7X3 374 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 ZDHHC3Q9NYG2 299 aa14.58□□□□□ -0.08
CLCNKA-201ENST00000331433 LOC730098B7Z3J9 87 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 K7EPI3 171 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 AHCYL1O43865 530 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 MT-ND1P03886 318 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 OR4D2P58180 307 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 MTPNP58546 118 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 CRY1Q16526 586 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 TTLL9Q3SXZ7 439 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 PTRH1Q86Y79 214 aaKnown RBP14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 CBR4Q8N4T8 237 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 METTL25Q8N6Q8 603 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 BRD9Q9H8M2 597 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 ZFP14Q9HCL3 533 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 DUS2Q9NX74 493 aaKnown RBP14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 B4GALT6Q9UBX8 382 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 CROCCQ5TZA2 2017 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 PTPRSQ13332 1948 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 TCRBV5S2A0A599 114 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 PLOD2O00469 737 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 TIMP1P01033 207 aa14.57□□□□□ -0.08
CLCNKA-201ENST00000331433 ADH1AP07327 375 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms