RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 DDA1Q9BW61 102 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 RAB33BQ9H082 229 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 GOLPH3Q9H4A6 298 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ATXN10Q9UBB4 475 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 SAE1Q9UBE0 346 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 RSPH14Q9UHP6 348 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 RIMKLBQ9ULI2 386 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 TMEM98Q9Y2Y6 226 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 MN1Q10571 1320 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 TPRP12270 2363 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 C2orf81A6NN90 581 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 H7C0S8 307 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 PPM1DO15297 605 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 INPP4BO15327 924 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ARHGAP6O43182 974 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 TNFSF15O95150 251 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 CRTAMO95727 393 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 C9P02748 559 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 JMJD7P0C870 316 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 THRAP10827 490 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 LIPCP11150 499 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 TNNT1P13805 278 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ZNF8P17098 575 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 LPOP22079 712 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 RBL1P28749 1068 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 STIP1P31948 543 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 HADHAP40939 763 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 NAP1L1P55209 391 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 UBE2IP63279 158 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 MSLNQ13421 630 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 BIRC2Q13490 618 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 GTF2H3Q13889 308 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 PARP6Q2NL67 630 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 MAP9Q49MG5 647 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 SNAP47Q5SQN1 464 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 CCDC181Q5TID7 509 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 KCTD11Q693B1 232 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 CYB5D1Q6P9G0 228 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 DOK6Q6PKX4 331 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 C4orf22Q6V702 233 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 GPR155Q7Z3F1 870 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 GLT6D1Q7Z4J2 308 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 B3GNT8Q7Z7M8 397 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 TRIM74Q86UV6 250 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 CARFQ8N187 725 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ACRBPQ8NEB7 543 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 SLC35B2Q8TB61 432 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 SLC37A2Q8TED4 501 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 HNRNPLLQ8WVV9 542 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 ULK4Q96C45 1275 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 LINC00615Q96LM1 132 aaPredicted RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 SMIM14Q96QK8 99 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 TAAR9Q96RI9 348 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 GORASP1Q9BQQ3 440 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 EPB41L5Q9HCM4 733 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 IL26Q9NPH9 171 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 POT1Q9NUX5 634 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 GEMIN8Q9NWZ8 242 aaKnown RBP6.23□□□□□ -1.41
SMG1-201ENST00000330588 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 CRIM1Q9NZV1 1036 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 EPHA6Q9UF33 1036 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ZNHIT2Q9UHR6 403 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 ZKSCAN5Q9Y2L8 839 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 LOXL2Q9Y4K0 774 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 SPO11Q9Y5K1 396 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 DUSP10Q9Y6W6 482 aa6.23□□□□□ -1.41
SMG1-201ENST00000330588 CACNA1BQ00975 2339 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 USP24Q9UPU5 2620 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 WDR87Q6ZQQ6 2873 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 ARHGEF17Q96PE2 2063 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 IGHV5-10-1A0A0J9YXX1 117 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 GLYATL1P3A0A0U1RQE8 302 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 A0A0U1RQS6 177 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 K7ENP7 123 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 GAPDHSO14556 408 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 TMPRSS2O15393 492 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 STX7O15400 261 aaKnown RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 CDK14O94921 469 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 ATP1A1P05023 1023 aaKnown RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 IDSP22304 550 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 ALDH4A1P30038 563 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 SLC5A2P31639 672 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 TMEM115Q12893 351 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 LAMB3Q13751 1172 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 GPR33Q49SQ1 333 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 BCL7AQ4VC05 210 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 ATP13A5Q4VNC0 1218 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 DRICH1Q6PGQ1 229 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 DARS2Q6PI48 645 aaKnown RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 INO80CQ6PI98 192 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 ZNF574Q6ZN55 896 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 CHST15Q7LFX5 561 aaPredicted RBP6.22□□□□□ -1.41
SMG1-201ENST00000330588 ARHGAP22Q7Z5H3 698 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 C11orf96Q7Z7L8 435 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 LINC00523Q86TU6 105 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 PLXDC1Q8IUK5 500 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMG1-201ENST00000330588 IPMKQ8NFU5 416 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 MAIP1Q8WWC4 291 aa6.22□□□□□ -1.41
SMG1-201ENST00000330588 PEX13Q92968 403 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms