RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 E2F3O00716 465 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 MAP3K13O43283 966 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 GUCA1CO95843 209 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 C6P13671 934 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 INHBCP55103 352 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 FBXW8Q8N3Y1 598 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 BEND7Q8N7W2 519 aaPredicted RBP19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 ZNF513Q8N8E2 541 aaPredicted RBP19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 CEP70Q8NHQ1 597 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 TTYH1Q9H313 450 aaPredicted RBP19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 DNAJC15Q9Y5T4 150 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 OR2AG2A6NM03 316 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 ANHXE9PGG2 379 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 AZIN1O14977 448 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 INPP4BO15327 924 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 PRDX3P30048 256 aaKnown RBP19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 CNTN1Q12860 1018 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 CUL3Q13618 768 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 GBX1Q14549 363 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 AAK1Q2M2I8 961 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 TMEM52BQ4KMG9 183 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 LDLRAP1Q5SW96 308 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 RAVER1Q8IY67 606 aaKnown RBP19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 PDPRQ8NCN5 879 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 CATSPER2Q96P56 530 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 KCNA7Q96RP8 456 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 P2RY13Q9BPV8 354 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 HGH1Q9BTY7 390 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 HDAC8Q9BY41 377 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 TICRRQ7Z2Z1 1910 aa19.9■□□□□ 0.78
RIPPLY3-201ENST00000329553 AP2A2O94973 939 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 SOD1P00441 154 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 CD1EP15812 388 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 KIR2DL1P43626 348 aaPredicted RBP19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 MTTPP55157 894 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 SEC13P55735 322 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 NAA20P61599 178 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 SATB1Q01826 763 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 TBL3Q12788 808 aaKnown RBP19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 COL19A1Q14993 1142 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 VRK3Q8IV63 474 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 RASGEF1AQ8N9B8 481 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 PHC3Q8NDX5 983 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 CSGALNACT1Q8TDX6 532 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 SLC26A7Q8TE54 656 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 NECTIN4Q96NY8 510 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 PRO3102Q9H379 93 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 ZNF385DQ9H6B1 395 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 ZNF225Q9UK10 706 aa19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 PTBP2Q9UKA9 531 aaKnown RBP19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 CNOT6Q9ULM6 557 aaKnown RBP19.89■□□□□ 0.77
RIPPLY3-201ENST00000329553 K7ESM1 405 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 TAPBPO15533 448 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 LZTS3O60299 673 aaPredicted RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 LYNP07948 512 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 ENO3P13929 434 aaPredicted RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 TIE1P35590 1138 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 PEX19P40855 299 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 IRX1P78414 480 aaPredicted RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 CREB5Q02930 508 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 PCBP2Q15366 365 aaKnown RBP eCLIP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 RNF220Q5VTB9 566 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 FAM46CQ5VWP2 391 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 KANK2Q63ZY3 851 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 CACUL1Q86Y37 369 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 PDSS2Q86YH6 399 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 HPS6Q86YV9 775 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 CPSF7Q8N684 471 aaKnown RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 MARK4Q96L34 752 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 PDP2Q9P2J9 529 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 FADS3Q9Y5Q0 445 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 MLYCDO95822 493 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 S100BP04271 92 aaPredicted RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 IGFBP4P22692 258 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 TNFRSF4P43489 277 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 CTSCP53634 463 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 TMEM115Q12893 351 aaPredicted RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 BOP1Q14137 746 aaKnown RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 PIP5KL1Q5T9C9 394 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 SYVN1Q86TM6 617 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 CCDC124Q96CT7 223 aaKnown RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 NUS1Q96E22 293 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 C3orf30Q96M34 536 aa19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 LENG8Q96PV6 779 aaPredicted RBP19.88■□□□□ 0.77
RIPPLY3-201ENST00000329553 EIF3FO00303 357 aaPredicted RBP19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 FESP07332 822 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 VCLP18206 1134 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 DRD3P35462 400 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 CAMK2GQ13555 558 aaPredicted RBP19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 OR56A4Q8NGH8 313 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 ELMO1Q92556 727 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 RAB7BQ96AH8 199 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 RSPH9Q9H1X1 276 aaPredicted RBP19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 RDH14Q9HBH5 336 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 TNPO3Q9Y5L0 923 aaKnown RBP19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 ATP6AP2A0A1C7CYW4 349 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 MID1O15344 667 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 NUAK1O60285 661 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 ATP6AP2O75787 350 aa19.87■□□□□ 0.77
RIPPLY3-201ENST00000329553 RBBP7Q16576 425 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms