RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 SNX7Q9UNH6 387 aa22.72■■□□□ 1.23
TMEM54-201ENST00000329151 SPTBN1Q01082 2364 aaKnown RBP22.72■■□□□ 1.23
TMEM54-201ENST00000329151 TNRC6AQ8NDV7 1962 aaKnown RBP22.71■■□□□ 1.23
TMEM54-201ENST00000329151 CYSRT1A8MQ03 144 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 GAPDHSO14556 408 aaPredicted RBP22.71■■□□□ 1.23
TMEM54-201ENST00000329151 KCNN4O15554 427 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 VPS4BO75351 444 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 ZNF189O75820 626 aaPredicted RBP22.71■■□□□ 1.23
TMEM54-201ENST00000329151 MARCKSL1P49006 195 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 EIF3EP60228 445 aaKnown RBP22.71■■□□□ 1.23
TMEM54-201ENST00000329151 TMPRSS15P98073 1019 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 ACVR1CQ8NER5 493 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 SPDYE1Q8NFV5 336 aaPredicted RBP22.71■■□□□ 1.23
TMEM54-201ENST00000329151 FERD3LQ96RJ6 166 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 VPS4AQ9UN37 437 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 PCDHA13Q9Y5I0 950 aa22.71■■□□□ 1.23
TMEM54-201ENST00000329151 SPTAN1Q13813 2472 aaKnown RBP22.7■■□□□ 1.22
TMEM54-201ENST00000329151 CCDC66A2RUB6 948 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 ARGFXA6NJG6 315 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 DNAJB5O75953 348 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 CYP2A7P20853 494 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 PSMB4P28070 264 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 CA5AP35218 305 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 KPNA2P52292 529 aaKnown RBP22.7■■□□□ 1.22
TMEM54-201ENST00000329151 OTUD4Q01804 1114 aaKnown RBP22.7■■□□□ 1.22
TMEM54-201ENST00000329151 SRSF1Q07955 248 aaKnown RBP eCLIP22.7■■□□□ 1.22
TMEM54-201ENST00000329151 ANKRD20A2Q5SQ80 823 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 ANKRD20A1Q5TYW2 823 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 ANKRD20A3Q5VUR7 823 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 CCDC170Q8IYT3 715 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 ACTL9Q8TC94 416 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 N4BP2L2Q92802 583 aaPredicted RBP22.7■■□□□ 1.22
TMEM54-201ENST00000329151 MIB2Q96AX9 1013 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 LINC00615Q96LM1 132 aaPredicted RBP22.7■■□□□ 1.22
TMEM54-201ENST00000329151 RMDN2Q96LZ7 410 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 TLR10Q9BXR5 811 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 TRIM5Q9C035 493 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 C10orf88Q9H8K7 445 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 SYTL2Q9HCH5 934 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 LATS2Q9NRM7 1088 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 C1GALT1Q9NS00 363 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 PIKFYVEQ9Y2I7 2098 aa22.7■■□□□ 1.22
TMEM54-201ENST00000329151 SEC16AO15027 2179 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 K7EM74 188 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 RBP3P10745 1247 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 PREPP48147 710 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 CCL11P51671 97 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 SNX20Q7Z614 316 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 NXPE1Q8N323 547 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 NAT14Q8WUY8 206 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 KRT35Q92764 455 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 ZNF501Q96CX3 271 aaPredicted RBP22.69■■□□□ 1.22
TMEM54-201ENST00000329151 CALR3Q96L12 384 aaKnown RBP22.69■■□□□ 1.22
TMEM54-201ENST00000329151 ALS2CR12Q96Q35 445 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 RUFY1Q96T51 708 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 TBL1YQ9BQ87 522 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 FEZ2Q9UHY8 353 aaPredicted RBP22.69■■□□□ 1.22
TMEM54-201ENST00000329151 BTRCQ9Y297 605 aa22.69■■□□□ 1.22
TMEM54-201ENST00000329151 MED13Q9UHV7 2174 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 SLC9B1P1A6NJY1 282 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 GP1BBP13224 206 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 ATP1B2P14415 290 aaPredicted RBP22.68■■□□□ 1.22
TMEM54-201ENST00000329151 PRLHRP49683 370 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 CHAF1BQ13112 559 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 ZRANB3Q5FWF4 1079 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 RANBP10Q6VN20 620 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 TAS2R42Q7RTR8 314 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 OR13C4Q8NGS5 318 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 OSBPL8Q9BZF1 889 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 ING2Q9H160 280 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 CHST8Q9H2A9 424 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 FAM96AQ9H5X1 160 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 AKIRIN1Q9H9L7 192 aaPredicted RBP22.68■■□□□ 1.22
TMEM54-201ENST00000329151 SERTAD3Q9UJW9 196 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 POMT2Q9UKY4 750 aa22.68■■□□□ 1.22
TMEM54-201ENST00000329151 USP9YO00507 2555 aaPredicted RBP22.67■■□□□ 1.22
TMEM54-201ENST00000329151 TMEM150CB9EJG8 249 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 MEN1O00255 615 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 TJP3O95049 919 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 GPS2Q13227 327 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 GPR33Q49SQ1 333 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 IZUMO3Q5VZ72 239 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 FBXO38Q6PIJ6 1188 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 SARM1Q6SZW1 724 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 SPATA13Q96N96 652 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 LRFN5Q96NI6 719 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 TRIM55Q9BYV6 548 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 ACTR5Q9H9F9 607 aaPredicted RBP22.67■■□□□ 1.22
TMEM54-201ENST00000329151 LRRC4CQ9HCJ2 640 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 EFR3BQ9Y2G0 817 aa22.67■■□□□ 1.22
TMEM54-201ENST00000329151 PRRC2CQ9Y520 2896 aaKnown RBP22.66■■□□□ 1.22
TMEM54-201ENST00000329151 C17orf113A0A1B0GUU1 675 aa22.66■■□□□ 1.22
TMEM54-201ENST00000329151 GOLGA6L9A6NEM1 432 aa22.66■■□□□ 1.22
TMEM54-201ENST00000329151 C9J4A7 227 aa22.66■■□□□ 1.22
TMEM54-201ENST00000329151 DDX3YO15523 660 aaKnown RBP22.66■■□□□ 1.22
TMEM54-201ENST00000329151 MC4RP32245 332 aa22.66■■□□□ 1.22
TMEM54-201ENST00000329151 CTNNA1P35221 906 aaKnown RBP22.66■■□□□ 1.22
TMEM54-201ENST00000329151 ADRA1AP35348 466 aa22.66■■□□□ 1.22
TMEM54-201ENST00000329151 RWDD2BP57060 319 aa22.66■■□□□ 1.22
TMEM54-201ENST00000329151 TBX2Q13207 712 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms