RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ALYREFQ86V81 257 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 LONP2Q86WA8 852 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 FOXJ1Q92949 421 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 KIAA1191Q96A73 305 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 EBF4Q9BQW3 602 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 VTI1BQ9UEU0 232 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 PIKFYVEQ9Y2I7 2098 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 OR2AG2A6NM03 316 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 PRAMEF26H0Y7S4 382 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 H3BMM5 538 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 SMIM24O75264 130 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 CDK14O94921 469 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 CHRNGP07510 517 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 T-ENOLP0DO92 83 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 MYCLP1P12525 358 aaPredicted RBP18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 IMPDH1P20839 514 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 IDH3AP50213 366 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 SRSF5Q13243 272 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 TUBB3Q13509 450 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 TBCCQ15814 346 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 MAVSQ7Z434 540 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 C10orf67Q8IYJ2 551 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 TMEFF1Q8IYR6 380 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 LSMEM2Q8N112 164 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 STAG3L4Q8TBR4 150 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 KLHL29Q96CT2 875 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 L3HYPDHQ96EM0 354 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 HSPA12BQ96MM6 686 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 TMEM237Q96Q45 408 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 SLC30A3Q99726 388 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 ZCCHC2Q9C0B9 1178 aaKnown RBP18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 NMUR2Q9GZQ4 415 aa18.42■□□□□ 0.54
EXOSC3-201ENST00000327304 NEMP2A6NFY4 417 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 E5RI56 91 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 TNFRSF10AO00220 468 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 MATN2O00339 956 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 AP2A2O94973 939 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 ZNF8P17098 575 aaPredicted RBP18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 CHRM3P20309 590 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 NUDT1P36639 197 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 KCNC1P48547 511 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 PFN3P60673 137 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 TPRG1LQ5T0D9 272 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 EPGNQ6UW88 154 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 KIRREL3Q8IZU9 778 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 CCNYL1Q8N7R7 359 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 BEND7Q8N7W2 519 aaPredicted RBP18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 GIMAP7Q8NHV1 300 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 CD200R1Q8TD46 325 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 INPP5DQ92835 1189 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 ATOH8Q96SQ7 321 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 TRMOQ9BU70 441 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 EML4Q9HC35 981 aaKnown RBP18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 SARS2Q9NP81 518 aaKnown RBP18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 C11orf16Q9NQ32 467 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 EIF2B4Q9UI10 523 aaKnown RBP18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 LNPEPQ9UIQ6 1025 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 FBXO4Q9UKT5 387 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 PCYT1BQ9Y5K3 369 aaPredicted RBP18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 HS3ST3A1Q9Y663 406 aa18.41■□□□□ 0.54
EXOSC3-201ENST00000327304 GON4LQ3T8J9 2241 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 MEI4A8MW99 385 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 HDAC3O15379 428 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 VEGFDO43915 354 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 KERAO60938 352 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 TRIM16O95361 564 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 OR56A5P0C7T3 313 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 MPSTP25325 297 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 CD27P26842 260 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 IL2P60568 153 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 TMEM220Q6QAJ8 160 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 SIDT2Q8NBJ9 832 aaKnown RBP18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 PDLIM5Q96HC4 596 aaKnown RBP18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 SLC6A18Q96N87 628 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 ZMYND15Q9H091 742 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 COG4Q9H9E3 785 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 DHRS7Q9Y394 339 aa18.4■□□□□ 0.54
EXOSC3-201ENST00000327304 TMEM202A6NGA9 273 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 CACNB4O00305 520 aaPredicted RBP18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 MAOBP27338 520 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 CLCN7P51798 805 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 KIAA1024LP59773 190 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 GTF2H3Q13889 308 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 OR4D1Q15615 310 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 ARMCX6Q7L4S7 300 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 ABI3BPQ7Z7G0 1075 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 OR13H1Q8NG92 308 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 LRMDAQ9H2I8 198 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 CYP4F12Q9HCS2 524 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 ZDHHC2Q9UIJ5 367 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 CEP192Q8TEP8 1941 aa18.39■□□□□ 0.54
EXOSC3-201ENST00000327304 SYCE1LA8MT33 242 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 LILRB5O75023 590 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 HOXC4P09017 264 aaPredicted RBP18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 PRLHRP49683 370 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 HERVK_113P63132 956 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 NFATC4Q14934 902 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 BCL7AQ4VC05 210 aa18.39■□□□□ 0.53
EXOSC3-201ENST00000327304 ZNF678Q5SXM1 525 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms