RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 H0Y3Z8 333 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 EIF3FO00303 357 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 KLF11O14901 512 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 RBP1P09455 135 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 ACSL1P33121 698 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TRIM23P36406 574 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 ATP6V0D1P61421 351 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 ASPHQ12797 758 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TMEM115Q12893 351 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 CYLC2Q14093 348 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 GBX1Q14549 363 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 PCLAFQ15004 111 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 DNAL1Q4LDG9 190 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3GQ6DHY5 549 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3CQ6IPX1 549 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 BORAQ6PGQ7 559 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 ISCA2Q86U28 154 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TBC1D3Q8IZP1 549 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 SPATA6LQ8N4H0 392 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 SPEM1Q8N4L4 309 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 RASGEF1AQ8N9B8 481 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 ZBTB8BQ8NAP8 495 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 PLA2G15Q8NCC3 412 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 FLCNQ8NFG4 579 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 OR2T34Q8NGX1 318 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 RHEBL1Q8TAI7 183 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 RAB3IL1Q8TBN0 382 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 LENG8Q96PV6 779 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 BTBD9Q96Q07 612 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 MIPEPQ99797 713 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 C1QTNF7Q9BXJ2 289 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TEX101Q9BY14 249 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 FAM126AQ9BYI3 521 aaPredicted RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 ZCCHC2Q9C0B9 1178 aaKnown RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 BTBD1Q9H0C5 482 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TFB2MQ9H5Q4 396 aaKnown RBP12.54□□□□□ -0.4
DDX39A-202ENST00000324340 TRIM39Q9HCM9 518 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 CD320Q9NPF0 282 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 CD93Q9NPY3 652 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 MUTYHQ9UIF7 546 aa12.54□□□□□ -0.4
DDX39A-202ENST00000324340 A0A0C4DFX4 3053 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 TRPM6Q9BX84 2022 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 LRRC72A6NJI9 287 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 TK2O00142 265 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 KPNA5O15131 536 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 INPP4BO15327 924 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 PFDN1O60925 122 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 MTX2O75431 263 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 CIB2O75838 187 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 PAK4O96013 591 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-202ENST00000324340 AOAHP28039 575 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 GLRBP48167 497 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 PRLHRP49683 370 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 IL2P60568 153 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 PPP2CBP62714 309 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 PPP2CAP67775 309 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 PHEXP78562 749 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 CDK3Q00526 305 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 SGCGQ13326 291 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 IRF4Q15306 451 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 BCL7AQ4VC05 210 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 ZYG11AQ6WRX3 759 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 ZNF554Q86TJ5 538 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 SPATA24Q86W54 205 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 MYLK4Q86YV6 388 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-202ENST00000324340 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 CPNE9Q8IYJ1 553 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 ZBTB2Q8N680 514 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 SMYD1Q8NB12 490 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 DENND6BQ8NEG7 585 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 TSTD1Q8NFU3 115 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 OR6Y1Q8NGX8 325 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 KIAA1191Q96A73 305 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 IER2Q9BTL4 223 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 TSSK1BQ9BXA7 367 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 TRIM55Q9BYV6 548 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 MANSC1Q9H8J5 431 aa12.53□□□□□ -0.4
DDX39A-202ENST00000324340 MBNL1Q9NR56 388 aaKnown RBP12.53□□□□□ -0.4
DDX39A-202ENST00000324340 PRUNE2Q8WUY3 3088 aa12.52□□□□□ -0.4
DDX39A-202ENST00000324340 WDR91A4D1P6 747 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 GPR89AB7ZAQ6 455 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 LATO43561 262 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 ZBTB14O43829 449 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 VEGFDO43915 354 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 PEX1O43933 1283 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 LILRB5O75023 590 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 KRT36O76013 467 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 TRIM16O95361 564 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 FTH1P02794 183 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 PCCBP05166 539 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 GPR89BP0CG08 455 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 CBSLP0DN79 551 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 ANPEPP15144 967 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 TFEBP19484 476 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 DGKAP23743 735 aa12.52□□□□□ -0.41
DDX39A-202ENST00000324340 OXTRP30559 389 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms