RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 NEK6Q9HC98 313 aa10.76□□□□□ -0.69
SNRNP200-201ENST00000323853 AKAP7Q9P0M2 348 aaPredicted RBP10.76□□□□□ -0.69
SNRNP200-201ENST00000323853 TESMINQ9Y4I5 508 aa10.76□□□□□ -0.69
SNRNP200-201ENST00000323853 CPQQ9Y646 472 aa10.76□□□□□ -0.69
SNRNP200-201ENST00000323853 SAGE2PA6NJ88 616 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 MYCLP1P12525 358 aaPredicted RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 IDSP22304 550 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 CSKP41240 450 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 NSG1P42857 185 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 SRSF11Q05519 484 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC9A4Q6AI14 798 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 TMEM110Q86TL2 294 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 MCUBQ9NWR8 336 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 TAS2R1Q9NYW7 299 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PPIEQ9UNP9 301 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF99A8MXY4 864 aaPredicted RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 CD247P20963 164 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 RPL26P61254 145 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ERVK-8P63133 956 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 BNC1Q01954 994 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 OGDHQ02218 1023 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ARHGAP1Q07960 439 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 HSPB3Q12988 150 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 TEAD4Q15561 434 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC30A8Q8IWU4 369 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 GJD3Q8N144 294 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PHF12Q96QT6 1004 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 MIR1-1HGQ9H1L0 117 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 TRNAU1APQ9NX07 287 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PHF11Q9UIL8 331 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 TOPAZ1Q8N9V7 1692 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 C9IYK1 514 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC7A1P30825 629 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 GJA9P57773 515 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ACTR3P61158 418 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 NFKB2Q00653 900 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 NOGQ13253 232 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 IFI44LQ53G44 452 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 BICRALQ6AI39 1079 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 GALNT13Q8IUC8 556 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 GPR65Q8IYL9 337 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 OR13C4Q8NGS5 318 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ASB9Q96DX5 294 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF347Q96SE7 839 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF358Q9NW07 568 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PTTG2Q9NZH5 202 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF282Q9UDV7 671 aaPredicted RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 MRPS33Q9Y291 106 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 F7P08709 466 aaPredicted RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 KHKP50053 298 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ARFIP1P53367 373 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 RAB25P57735 213 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 CAP1Q01518 475 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PARGQ86W56 976 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 FBXO22Q8NEZ5 403 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PIGXQ8TBF5 258 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 GTPBP3Q969Y2 492 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 TRIM39Q9HCM9 518 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 MBD2Q9UBB5 411 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF221Q9UK13 617 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 MAN2B2Q9Y2E5 1009 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 H3BNH8 94 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 OR1F1O43749 312 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PGRP06401 933 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 MTHFD1P11586 935 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 FAM174BQ3ZCQ3 159 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 C5orf22Q49AR2 442 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 TMEM220Q6QAJ8 160 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ZZZ3Q8IYH5 903 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF354BQ96LW1 612 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 CNPPD1Q9BV87 410 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 CXorf21Q9HAI6 301 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 PIGVQ9NUD9 493 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 DEC1Q9P2X7 70 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 LRP6O75581 1613 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 OR51F1A6NGY5 319 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ENPP3O14638 875 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 KLF11O14901 512 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ERN1O75460 977 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 ECT2LQ008S8 904 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 SLC35G1Q2M3R5 365 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 RNASE12Q5GAN4 147 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 USP43Q70EL4 1123 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 CHST15Q7LFX5 561 aaPredicted RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 DNASE1L2Q92874 299 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 KLHL32Q96NJ5 620 aa10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 GPATCH1Q9BRR8 931 aaKnown RBP10.75□□□□□ -0.69
SNRNP200-201ENST00000323853 TTC24A2A3L6 582 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 AIREO43918 545 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ECI2O75521 394 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 HOXD13P35453 343 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 YAP1P46937 504 aaKnown RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 EPGNQ6UW88 154 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF570Q96NI8 536 aa10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 ZNF317Q96PQ6 595 aaPredicted RBP10.74□□□□□ -0.69
SNRNP200-201ENST00000323853 CDK15Q96Q40 435 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms