RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TIGD4Q8IY51 512 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC39A3Q9BRY0 314 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 A0A1B0GVC2 190 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 H7C2Y5 167 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC9A3P48764 834 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 APLP1P51693 650 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 NOMO3P69849 1222 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 UBAP2Q5T6F2 1119 aaKnown RBP16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 OR10G6Q8NH81 332 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 STYXQ8WUJ0 223 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 BRINP2Q9C0B6 783 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 SHROOM3Q8TF72 1996 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 MAPK14Q16539 360 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 C9orf43Q8TAL5 461 aaPredicted RBP16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 CREB3L1Q96BA8 519 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 COQ10BQ9H8M1 238 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 ACP6Q9NPH0 428 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 NPHS1O60500 1241 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 C2P06681 752 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 ANXA4P09525 319 aaPredicted RBP16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 NIPAL1Q6NVV3 410 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 TDRPQ86YL5 185 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 FSTL5Q8N475 847 aaPredicted RBP16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 STOML3Q8TAV4 291 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 ZNF282Q9UDV7 671 aaPredicted RBP16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 RCCD1A6NED2 376 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 H3BM21 787 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 hCG_2039718K7EN88 272 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 FAM174BQ3ZCQ3 159 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC25A25Q6KCM7 469 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 LRRC70Q7Z2Q7 622 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 COPS7AQ9UBW8 275 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 ZSCAN5BA6NJL1 495 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 NOBOXO60393 691 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC9B1Q4ZJI4 515 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 TOMM5Q8N4H5 51 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 OR8D1Q8WZ84 308 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 POLLQ9UGP5 575 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 CYP11A1P05108 521 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 AFF1P51825 1210 aaKnown RBP16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 TEX44Q53QW1 395 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 GHDCQ8N2G8 530 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 TRAPPC12Q8WVT3 735 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 BRD7Q9NPI1 651 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 PTCH2Q9Y6C5 1203 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 PDPK1O15530 556 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 TARDBPQ13148 414 aaKnown RBP eCLIP16.64■□□□□ 0.257e-9■■■■□ 22.1
SMCHD1-201ENST00000320876 CERCAMQ5T4B2 595 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 IRF2BP2Q7Z5L9 587 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 CADM2Q8N3J6 435 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 LRRC3Q9BY71 257 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 TREM1Q9NP99 234 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 TESMINQ9Y4I5 508 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 TOR1BO14657 336 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 C2orf80Q0P641 193 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 MADCAM1Q13477 382 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 SLC1A5Q15758 541 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 ZNF781Q8N8C0 355 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 OR5K1Q8NHB7 308 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 LENG8Q96PV6 779 aaPredicted RBP16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 PCBD2Q9H0N5 130 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 C14orf105Q9NVL8 296 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 POMPQ9Y244 141 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 DAPL1A0PJW8 107 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 ISPDA4D126 451 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 TRIM64CA6NLI5 447 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 PGAM2P15259 253 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 IL12BP29460 328 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 CLCQ05315 142 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 PRKD1Q15139 912 aaPredicted RBP16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 CIR1Q86X95 450 aaPredicted RBP16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 PCDH19Q8TAB3 1148 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 ERLEC1Q96DZ1 483 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 H0YJX3 145 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 SYCE2Q6PIF2 218 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 CERS6Q6ZMG9 384 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 ZBTB8BQ8NAP8 495 aaPredicted RBP16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 GALNT6Q8NCL4 622 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 ALG3Q92685 438 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 BTN2A3PQ96KV6 586 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 FAM155BO75949 473 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 MT-ND1P03886 318 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 MPP1Q00013 466 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 PIGZQ86VD9 579 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 PM20D2Q8IYS1 436 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 ANKFN1Q8N957 763 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 NSMCE3Q96MG7 304 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 ADARB2Q9NS39 739 aaKnown RBP16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 LYARQ9NX58 379 aaKnown RBP16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 DNAJB9Q9UBS3 223 aa16.64■□□□□ 0.25
SMCHD1-201ENST00000320876 ADGRB2O60241 1585 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 ENTPD6O75354 484 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 AKR1A1P14550 325 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 GBX2P52951 348 aaPredicted RBP16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 SP140Q13342 867 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 GPR158Q5T848 1215 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 PACRGLQ8N7B6 248 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 ASB9Q96DX5 294 aa16.63■□□□□ 0.25
SMCHD1-201ENST00000320876 FTHL17Q9BXU8 183 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms