RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 MYLPFQ96A32 169 aa14.46□□□□□ -0.1
COL6A2-202ENST00000310645 ZNF300Q96RE9 604 aaPredicted RBP14.46□□□□□ -0.1
COL6A2-202ENST00000310645 SLIRPQ9GZT3 109 aaKnown RBP14.46□□□□□ -0.1
COL6A2-202ENST00000310645 DCSTAMPQ9H295 470 aa14.46□□□□□ -0.1
COL6A2-202ENST00000310645 TPRKBQ9Y3C4 175 aa14.46□□□□□ -0.1
COL6A2-202ENST00000310645 HHLA1C9JL84 531 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 MGEA5O60502 916 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 UPK1BO75841 260 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 CCNKO75909 580 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 CCDC159P0C7I6 412 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 PWP1Q13610 501 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 AHSA2Q719I0 299 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 MMAAQ8IVH4 418 aaKnown RBP14.45□□□□□ -0.1
COL6A2-202ENST00000310645 OR56A4Q8NGH8 313 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 OR4L1Q8NH43 312 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 CLHC1Q8NHS4 586 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 RHEBL1Q8TAI7 183 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 ATL1Q8WXF7 558 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 SMARCD1Q96GM5 515 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 RDH12Q96NR8 316 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 AARSD1Q9BTE6 412 aaKnown RBP14.45□□□□□ -0.1
COL6A2-202ENST00000310645 ZFP14Q9HCL3 533 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 PCTPQ9UKL6 214 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 ELOVL7A1L3X0 281 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 ANKRD34BA5PLL1 514 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 GABRDO14764 452 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 GPR32O75388 356 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 PAPSS2O95340 614 aaPredicted RBP14.45□□□□□ -0.1
COL6A2-202ENST00000310645 SERPINA1P01009 418 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 KRT8P05787 483 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 TRAF3Q13114 568 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 RFTN2Q52LD8 501 aaPredicted RBP14.45□□□□□ -0.1
COL6A2-202ENST00000310645 XKR7Q5GH72 579 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 RAB41Q5JT25 222 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 VARS2Q5ST30 1063 aaKnown RBP14.45□□□□□ -0.1
COL6A2-202ENST00000310645 SVOPLQ8N434 492 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 PJA1Q8NG27 643 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 OR5K1Q8NHB7 308 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 PPTC7Q8NI37 304 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 HASPINQ8TF76 798 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 FUBP1Q96AE4 644 aaKnown RBP14.45□□□□□ -0.1
COL6A2-202ENST00000310645 REXO4Q9GZR2 422 aaKnown RBP14.45□□□□□ -0.1
COL6A2-202ENST00000310645 ARNT2Q9HBZ2 717 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 SYTL2Q9HCH5 934 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 AMBNQ9NP70 447 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 TAS2R13Q9NYV9 303 aa14.45□□□□□ -0.1
COL6A2-202ENST00000310645 ILVBLA1L0T0 632 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 MROH6A6NGR9 719 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 FGF10O15520 208 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 IRAK2O43187 625 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 CYP4F3Q08477 520 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 ACOX1Q15067 660 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 NDUFA5Q16718 116 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 FAM174BQ3ZCQ3 159 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 GATAD2AQ86YP4 633 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 APOBEC3FQ8IUX4 373 aaKnown RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PHF10Q8WUB8 498 aaKnown RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 YIPF6Q96EC8 236 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PPP1R2P1Q96PQ5 205 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 SEMA3CQ99985 751 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 CEP44Q9C0F1 390 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 THG1LQ9NWX6 298 aaKnown RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PCDHGA3Q9Y5H0 932 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 GMPPBQ9Y5P6 360 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 TSC2P49815 1807 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 DNAJC25-GNG10A0A024R161 153 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 LOC100506127A0A0U1RQW1 187 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 CASTOR2A6NHX0 329 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 GUCY1B2O75343 617 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 ZNF682O95780 498 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 RPS17P08708 135 aaKnown RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 RPS12P25398 132 aaKnown RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 ERVPABLB-1P60509 514 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 RPL38P63173 70 aaKnown RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 GRIK2Q13002 908 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PON2Q15165 354 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 MAPKAPK3Q16644 382 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 LETMD1Q6P1Q0 360 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 LIMS2Q7Z4I7 341 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 RTL3Q8N8U3 475 aaKnown RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PROX1Q92786 737 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PYCR2Q96C36 320 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 ACTL8Q9H568 366 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 KAT8Q9H7Z6 458 aaKnown RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 TMEFF2Q9UIK5 374 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PLXNA1Q9UIW2 1896 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PTGESO14684 152 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 FFAR3O14843 346 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 GPR42O15529 346 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 RGS10O43665 173 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 NDUFS3O75489 264 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 KCNE1P15382 129 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 EPHA2P29317 976 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 CDKN1CP49918 316 aaPredicted RBP14.44□□□□□ -0.1
COL6A2-202ENST00000310645 CLCNKBP51801 687 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 PTPRNQ16849 979 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 TAPT1Q6NXT6 567 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 TMC5Q6UXY8 1006 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 CYP4Z1Q86W10 505 aa14.44□□□□□ -0.1
COL6A2-202ENST00000310645 SVOPQ8N4V2 548 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms