RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CD247P20963 164 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 PRPS1L1P21108 318 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 GSTM3P21266 225 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 CRISP3P54108 245 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 RAB15P59190 212 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 FOXK1P85037 733 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 RHAGQ02094 409 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 PLP2Q04941 152 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 LRP8Q14114 963 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 KIAA0930Q6ICG6 404 aaPredicted RBP3.15□□□□□ -1.91
CLOCK-201ENST00000309964 ADGRA1Q86SQ6 560 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 ARMC8Q8IUR7 673 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 DEFB107AQ8IZN7 70 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 ZBTB2Q8N680 514 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 CNTD1Q8N815 330 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 CDYL2Q8N8U2 506 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 SMPDL3AQ92484 453 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 NACC2Q96BF6 587 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 NUS1Q96E22 293 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 FCRL5Q96RD9 977 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 WDR24Q96S15 920 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 IER2Q9BTL4 223 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 ACTL8Q9H568 366 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 NMUR1Q9HB89 426 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 TMBIM4Q9HC24 238 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 Q9N2J8 555 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 ALG13Q9NP73 1137 aaKnown RBP3.15□□□□□ -1.91
CLOCK-201ENST00000309964 ZDHHC3Q9NYG2 299 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 DGKBQ9Y6T7 804 aa3.15□□□□□ -1.91
CLOCK-201ENST00000309964 USP27XA6NNY8 438 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 YDJCA8MPS7 323 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ANKRD66B4E2M5 251 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ERAL1O75616 437 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HSMCR30P0CW71 290 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HSD3B1P14060 373 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF823P16415 610 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HSD3B2P26439 372 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CHRNB4P30926 498 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MLLT3P42568 568 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IL5RAQ01344 420 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DMWDQ09019 674 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SF3A3Q12874 501 aaKnown RBP eCLIP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TRAF3Q13114 568 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FUT11Q495W5 492 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LRRC70Q7Z2Q7 622 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 P4HA3Q7Z4N8 544 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 C6orf120Q7Z4R8 191 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF440Q8IYI8 595 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF276Q8N554 614 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 DNASE1L2Q92874 299 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ABTB1Q969K4 478 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 KIAA1191Q96A73 305 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 AMDHD1Q96NU7 426 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 GPER1Q99527 375 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 FAM118BQ9BPY3 351 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SSU72Q9NP77 194 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LYARQ9NX58 379 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IKZF3Q9UKT9 509 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MAN2B2Q9Y2E5 1009 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 AP1M2Q9Y6Q5 423 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 A0A1W2PQH9 124 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 METTL21EPA6NDL7 271 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF726A6NNF4 738 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 K7EPI3 171 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TPP1O14773 563 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ADAMTS3O15072 1205 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF185O15231 689 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 KAT7O95251 611 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 KCNK5O95279 499 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 LPLP06858 475 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TFPIP10646 304 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TCN1P20061 433 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SLC6A6P31641 620 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SOX9P48436 509 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 RRADP55042 308 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 MFSD13AQ14CX5 517 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF792Q3KQV3 632 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TSTD2Q5T7W7 516 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CES3Q6UWW8 571 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF730Q6ZMV8 503 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TMPPEQ6ZT21 453 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TPRG1Q6ZUI0 275 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 NYAP1Q6ZVC0 841 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF550Q7Z398 422 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HID1Q8IV36 788 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 OFCC1Q8IZS5 231 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 IL22RA1Q8N6P7 574 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ZSCAN4Q8NAM6 433 aaPredicted RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 ATAD1Q8NBU5 361 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 SETD7Q8WTS6 366 aaKnown RBP3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TRAPPC12Q8WVT3 735 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 BORCS6Q96GS4 357 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 BTBD9Q96Q07 612 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CYP2S1Q96SQ9 504 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CMKLR1Q99788 373 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 APOL2Q9BQE5 337 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM79Q9BSE2 394 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 HERPUD2Q9BSE4 406 aa3.14□□□□□ -1.91
CLOCK-201ENST00000309964 CCDC28BQ9BUN5 200 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms