RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TWSG1Q9GZX9 223 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 EIF2B3Q9NR50 452 aaKnown RBP19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 WDR70Q9NW82 654 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 ZKSCAN5Q9Y2L8 839 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 TCAF1Q9Y4C2 921 aa19.31■□□□□ 0.68
PDZRN3-202ENST00000308537 NRDCO43847 1150 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 OR1I1O60431 355 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 RASSF9O75901 435 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 AP2A2O94973 939 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 GOT2P00505 430 aaKnown RBP19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 APRTP07741 180 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 FOLR1P15328 257 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 F8A1P23610 371 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 ADRA1DP25100 572 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 CXCR5P32302 372 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 NSG1P42857 185 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 PREPP48147 710 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 CD151P48509 253 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 KPNA2P52292 529 aaKnown RBP19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 FOXM1Q08050 763 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 PLCL1Q15111 1095 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 UNC5BQ8IZJ1 945 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 IL22RA1Q8N6P7 574 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 DNAAF3Q8N9W5 541 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 UBXN4Q92575 508 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 PEX13Q92968 403 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 SLC45A3Q96JT2 553 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 HRASLS2Q9NWW9 162 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 IL17BQ9UHF5 180 aa19.3■□□□□ 0.68
PDZRN3-202ENST00000308537 SLC5A10A0PJK1 596 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 TLCD2A6NGC4 264 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 ITGB6P18564 788 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 MAP4P27816 1152 aaKnown RBP19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 ACADLP28330 430 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 STAT5AP42229 794 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 ABHD18Q0P651 414 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 RPA4Q13156 261 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 BOP1Q14137 746 aaKnown RBP19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 IL11RAQ14626 422 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 KCNAB1Q14722 419 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 TBR1Q16650 682 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 D2HGDHQ8N465 521 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 CCDC89Q8N998 374 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 MED8Q96G25 268 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 CD180Q99467 661 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 TREX1Q9NSU2 369 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 SMARCAL1Q9NZC9 954 aa19.29■□□□□ 0.68
PDZRN3-202ENST00000308537 FER1L5A0AVI2 2057 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 TCRBV7S3A2A0A539 114 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 OR6C74A6NCV1 312 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 EIF4E1BA6NMX2 242 aaKnown RBP19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 BTN3A3O00478 584 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 GSTM1P09488 218 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 TPBGLP0DKB5 382 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 ARCN1P48444 511 aaKnown RBP19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 GSTM4Q03013 218 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 KLHL35Q6PF15 583 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 FBXO38Q6PIJ6 1188 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 PPP1R21Q6ZMI0 780 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 RASGEF1CQ8N431 466 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 ACVR1CQ8NER5 493 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 OR52E1Q8NGJ3 308 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 CHRAC1Q9NRG0 131 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 MARCH4Q9P2E8 410 aaPredicted RBP19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 POMT2Q9UKY4 750 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 BTRCQ9Y297 605 aa19.28■□□□□ 0.68
PDZRN3-202ENST00000308537 BHMG1C9JSJ3 638 aaPredicted RBP19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 E7EVH7 732 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 CEP104O60308 925 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 SPAG6O75602 509 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 EBLN1P0CF75 366 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 ARNTP27540 789 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 NDUFS1P28331 727 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 CRADDP78560 199 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 C19orf57Q0VDD7 668 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 DNTTIP2Q5QJE6 756 aaKnown RBP19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 TTC27Q6P3X3 843 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 AFTPHQ6ULP2 937 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 NAPRTQ6XQN6 538 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 OOSP2Q86WS3 158 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 KMT5CQ86Y97 462 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 REXO1L1PQ8IX06 675 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 PHC3Q8NDX5 983 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 OR4E2Q8NGC2 313 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 OR4L1Q8NH43 312 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 LKAAEAR1Q8TD35 194 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 ULBP3Q9BZM4 244 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 TFB2MQ9H5Q4 396 aaKnown RBP19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 CDYLQ9Y232 598 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 HEBP2Q9Y5Z4 205 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 COLEC10Q9Y6Z7 277 aa19.27■□□□□ 0.68
PDZRN3-202ENST00000308537 LIN7AO14910 233 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 NKX2-8O15522 239 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 KIAA0754O94854 1291 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 POLR2CP19387 275 aaPredicted RBP19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 MAGEA6P43360 314 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 GSE1Q14687 1217 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 PWWP2BQ6NUJ5 590 aa19.26■□□□□ 0.67
PDZRN3-202ENST00000308537 ADGRF3Q8IZF5 1079 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms