RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 OR1F1O43749 312 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 CD247P20963 164 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 GRIA1P42261 906 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 TRPV3Q8NET8 790 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 CDADC1Q9BWV3 514 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 SLC30A4O14863 429 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 MPZL2O60487 215 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 FAUP35544 74 aaKnown RBP13.74□□□□□ -0.21
PRKCB-201ENST00000303531 MNDAP41218 407 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 RAB25P57735 213 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 PPP2R2BQ00005 443 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 SYPL2Q5VXT5 272 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 UNC5BQ8IZJ1 945 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 ZNF570Q96NI8 536 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 CNTN3Q9P232 1028 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 SLC38A8A6NNN8 435 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 BCAP31P51572 246 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 CBX3Q13185 183 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 RAB43Q86YS6 212 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 PCDHAC1Q9H158 963 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 DSN1Q9H410 356 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 FBXW2Q9UKT8 454 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 ITM2AO43736 263 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 GMFGO60234 142 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 BNC1Q01954 994 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 CARTPTQ16568 116 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 TMEM198Q66K66 360 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 FAM129CQ86XR2 697 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 GALNT13Q8IUC8 556 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 SIX5Q8N196 739 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 TRPV1Q8NER1 839 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 OR10H5Q8NGA6 315 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 KAT2AQ92830 837 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 NEMP2A6NFY4 417 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 VIPP01282 170 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 CFHP08603 1231 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 PHF12Q96QT6 1004 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 FCRL5Q96RD9 977 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 PTPN18Q99952 460 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 NFATC1O95644 943 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 TFPIP10646 304 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 RPL17P18621 184 aaKnown RBP13.74□□□□□ -0.21
PRKCB-201ENST00000303531 NSG1P42857 185 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 CCR3P51677 355 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 ACTR3P61158 418 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 ZFP69Q49AA0 526 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 FAM91A1Q658Y4 838 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 NCBP2-AS2Q69YL0 99 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 CHST15Q7LFX5 561 aaPredicted RBP13.74□□□□□ -0.21
PRKCB-201ENST00000303531 FEM1CQ96JP0 617 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 OXSMQ9NWU1 459 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 COLEC10Q9Y6Z7 277 aa13.74□□□□□ -0.21
PRKCB-201ENST00000303531 OR51F1A6NGY5 319 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 HERVK_113P63132 956 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TXNRD3NBQ6F5E7 133 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TMEM220Q6QAJ8 160 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 CLEC20AQ6ZU45 233 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 GLB1L3Q8NCI6 653 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 PJA1Q8NG27 643 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TP53INP1Q96A56 240 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TRNT1Q96Q11 434 aaKnown RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 ERVK-6Q9BXR3 956 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 ZNF221Q9UK13 617 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 RAP2AP10114 183 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 ARFIP1P53367 373 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 NPAS4Q8IUM7 802 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 RASSF5Q8WWW0 418 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 SLCO2A1Q92959 643 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 B3GALT6Q96L58 329 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 EVA1BQ9NVM1 165 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TLL2Q9Y6L7 1015 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 RIIAD1A6NNX1 92 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 CXorf49A8MYA2 514 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 SLC51AQ86UW1 340 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 OR14C36Q8NHC7 312 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 HAPLN3Q96S86 360 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 HEPHQ9BQS7 1158 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TFB2MQ9H5Q4 396 aaKnown RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 NME6O75414 186 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 MYCLP1P12525 358 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 AZGP1P25311 298 aaKnown RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 CMPK1P30085 196 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 MXD1Q05195 221 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 OGFOD2Q6N063 350 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 NANOGNBQ7Z5D8 188 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 ZMIZ2Q8NF64 920 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 OR13C4Q8NGS5 318 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 IPCEF1Q8WWN9 437 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 SMG7Q92540 1137 aaKnown RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 FAM234BA2RU67 622 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TPST2O60704 377 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 CCNHP51946 323 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 TEAD4Q15561 434 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 PRSS55Q6UWB4 352 aaPredicted RBP13.73□□□□□ -0.21
PRKCB-201ENST00000303531 CYP2U1Q7Z449 544 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 PIGXQ8TBF5 258 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 LMLNQ96KR4 655 aa13.73□□□□□ -0.21
PRKCB-201ENST00000303531 CKLFQ9UBR5 152 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms