RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 ZNF382Q96SR6 550 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 FAM83DQ9H4H8 585 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 ACTR8Q9H981 624 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 SUN2Q9UH99 717 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 SARDHQ9UL12 918 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 MAFFQ9ULX9 164 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 LTBP2Q14767 1821 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 SPTBN5Q9NRC6 3674 aaKnown RBP14.3□□□□□ -0.12
SMG8-201ENST00000300917 TRBV5-4A0A0C4DH59 114 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 CCDC154A6NI56 674 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 RSL1D1O76021 490 aaKnown RBP14.3□□□□□ -0.12
SMG8-201ENST00000300917 CSNK1DP48730 415 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 GPR33Q49SQ1 333 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 ATG2BQ96BY7 2078 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 RHBDF1Q96CC6 855 aa14.3□□□□□ -0.12
SMG8-201ENST00000300917 ATP6V1B2P21281 511 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 TTLL9Q3SXZ7 439 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 C6orf10Q5SRN2 563 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 C9orf50Q5SZB4 431 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 PDSS2Q86YH6 399 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 SLC15A3Q8IY34 581 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 LRRC58Q96CX6 371 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 RIC8BQ9NVN3 520 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 AIG1Q9NVV5 245 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 CMTM6Q9NX76 183 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 PTBP2Q9UKA9 531 aaKnown RBP14.29□□□□□ -0.12
SMG8-201ENST00000300917 PCDHGB4Q9UN71 923 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 PDE10AQ9Y233 779 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 PCDHGB5Q9Y5G0 923 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 IRAK3Q9Y616 596 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 MYOCOSA0A1B0GUC4 107 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 ASPDHA6ND91 283 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 CYP17A1P05093 508 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 OR56A5P0C7T3 313 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 POLR2JP52435 117 aaKnown RBP14.29□□□□□ -0.12
SMG8-201ENST00000300917 DDX39BQ13838 428 aaKnown RBP14.29□□□□□ -0.12
SMG8-201ENST00000300917 IMPG1Q17R60 797 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 BLOC1S3Q6QNY0 202 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 MACC1Q6ZN28 852 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 CANT1Q8WVQ1 401 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 GFM2Q969S9 779 aaKnown RBP14.29□□□□□ -0.12
SMG8-201ENST00000300917 ASB9Q96DX5 294 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 TUBGCP5Q96RT8 1024 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 ZNF490Q9ULM2 529 aaPredicted RBP14.29□□□□□ -0.12
SMG8-201ENST00000300917 OARD1Q9Y530 152 aa14.29□□□□□ -0.12
SMG8-201ENST00000300917 PRRT4C9JH25 899 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 FXYD1O00168 92 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 TULP3O75386 442 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 OTCP00480 354 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 TIMP2P16035 220 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 RPS3P23396 243 aaKnown RBP eCLIP14.28□□□□□ -0.129e-7■■■■□ 19.6
SMG8-201ENST00000300917 ACADVLP49748 655 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 GK3PQ14409 553 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 ZXDCQ2QGD7 858 aaPredicted RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 DHFR2Q86XF0 187 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 CDC26Q8NHZ8 85 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 ZNF707Q96C28 371 aaPredicted RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 MRGPRX3Q96LB0 322 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 CD244Q9BZW8 370 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 KCTD5Q9NXV2 234 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 TNPO3Q9Y5L0 923 aaKnown RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 FADS2P1A8MWK0 482 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 SEC22BO75396 215 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 STK16O75716 305 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 WDR47O94967 919 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 NELFEP18615 380 aaKnown RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 WASP42768 502 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 NRIP1P48552 1158 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 CTSCP53634 463 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 ERVK-8P63133 956 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 XKR7Q5GH72 579 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 SAMD4BQ5PRF9 694 aaKnown RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 GET4Q7L5D6 327 aaPredicted RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 PROKR1Q8TCW9 393 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 PKD2L2Q9NZM6 624 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 TMEM181Q9P2C4 612 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 AP4S1Q9Y587 144 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 MAP3K13O43283 966 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 AKAP10O43572 662 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 HSPA8P11142 646 aaKnown RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 ADH5P11766 374 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 ATP1B2P14415 290 aaPredicted RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 EPB42P16452 691 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 SLC6A2P23975 617 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 MTPNP58546 118 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 POLR2LP62875 67 aaKnown RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 MTX3Q5HYI7 312 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 PRSS36Q5K4E3 855 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 METTL3Q86U44 580 aaKnown RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 AHI1Q8N157 1196 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 KRTCAP2Q8N6L1 136 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 FRS2Q8WU20 508 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 EME1Q96AY2 570 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 MCCC1Q96RQ3 725 aaPredicted RBP14.28□□□□□ -0.12
SMG8-201ENST00000300917 P2RY13Q9BPV8 354 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 TBC1D14Q9P2M4 693 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 SLC22A14Q9Y267 594 aa14.28□□□□□ -0.12
SMG8-201ENST00000300917 PABPN1LA6NDY0 278 aaKnown RBP14.27□□□□□ -0.12
SMG8-201ENST00000300917 C16orf96A6NNT2 1141 aa14.27□□□□□ -0.12
SMG8-201ENST00000300917 B3GALT4O96024 378 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms