RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 POT1Q9NUX5 634 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 ZNF624Q9P2J8 865 aaPredicted RBP16.05■□□□□ 0.16
NPM1-201ENST00000296930 KLHL3Q9UH77 587 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 AAR2Q9Y312 384 aaKnown RBP16.05■□□□□ 0.16
NPM1-201ENST00000296930 B8ZZF3 427 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 BANF1O75531 89 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 ANKRD34CP0C6C1 535 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 WT1P19544 449 aaPredicted RBP16.05■□□□□ 0.16
NPM1-201ENST00000296930 GEMP55040 296 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 ITGA9Q13797 1035 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 CASP8Q14790 479 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 FASTKD3Q14CZ7 662 aaKnown RBP16.05■□□□□ 0.16
NPM1-201ENST00000296930 SEPT7Q16181 437 aaKnown RBP16.05■□□□□ 0.16
NPM1-201ENST00000296930 UAP1Q16222 522 aaPredicted RBP16.05■□□□□ 0.16
NPM1-201ENST00000296930 LDLRAP1Q5SW96 308 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 CENPUQ71F23 418 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 C11orf96Q7Z7L8 435 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 RBM12BQ8IXT5 1001 aaKnown RBP16.05■□□□□ 0.16
NPM1-201ENST00000296930 CACNA2D3Q8IZS8 1091 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 AGGF1Q8N302 714 aaeCLIP16.05■□□□□ 0.161e-7■■□□□ 12.1
NPM1-201ENST00000296930 EXTL1Q92935 676 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 PPP1R2P1Q96PQ5 205 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 WDR83Q9BRX9 315 aaKnown RBP16.05■□□□□ 0.16
NPM1-201ENST00000296930 FUT8Q9BYC5 575 aa16.05■□□□□ 0.16
NPM1-201ENST00000296930 ZNF106Q9H2Y7 1883 aaKnown RBP16.04■□□□□ 0.16
NPM1-201ENST00000296930 GLYATL1P3A0A0U1RQE8 302 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 RAD1O60671 282 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 AVILO75366 819 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 UBXN7O94888 489 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 BRAFP15056 766 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 AMD1P17707 334 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 RPL10P27635 214 aaKnown RBP16.04■□□□□ 0.16
NPM1-201ENST00000296930 PMS2P54278 862 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 PDIA2Q13087 525 aaKnown RBP16.04■□□□□ 0.16
NPM1-201ENST00000296930 CHRNA6Q15825 494 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 UBAP2Q5T6F2 1119 aaKnown RBP16.04■□□□□ 0.16
NPM1-201ENST00000296930 FAM151BQ6UXP7 276 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 PDIK1LQ8N165 341 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 CXorf40BQ96DE9 158 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 EPB41L4BQ9H329 900 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 CDC42EP4Q9H3Q1 356 aaKnown RBP16.04■□□□□ 0.16
NPM1-201ENST00000296930 LRRC40Q9H9A6 602 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 XAB2Q9HCS7 855 aaKnown RBP16.04■□□□□ 0.16
NPM1-201ENST00000296930 SAYSD1Q9NPB0 183 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 PILRAQ9UKJ1 303 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 BOD1L1Q8NFC6 3051 aa16.04■□□□□ 0.16
NPM1-201ENST00000296930 EIF3HO15372 352 aaKnown RBP eCLIP16.03■□□□□ 0.164e-6■□□□□ 9.7
NPM1-201ENST00000296930 PSMD3O43242 534 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 C9P02748 559 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 MLNP12872 115 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 ADRA1AP35348 466 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 HSD17B3P37058 310 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 HALP42357 657 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SARNPP82979 210 aaKnown RBP16.03■□□□□ 0.16
NPM1-201ENST00000296930 LRRC8BQ6P9F7 803 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 CEP128Q6ZU80 1094 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 EXD3Q8N9H8 876 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 DDHD1Q8NEL9 900 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 C9orf72Q96LT7 481 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SLC40A1Q9NP59 571 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 OGFRQ9NZT2 677 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SLC30A1Q9Y6M5 507 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SPTA1P02549 2419 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 TLN1Q9Y490 2541 aaKnown RBP16.03■□□□□ 0.16
NPM1-201ENST00000296930 OR52A4PA6NMU1 304 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 POLR1CO15160 346 aaPredicted RBP16.03■□□□□ 0.16
NPM1-201ENST00000296930 STX7O15400 261 aaKnown RBP16.03■□□□□ 0.16
NPM1-201ENST00000296930 TOX3O15405 576 aaPredicted RBP16.03■□□□□ 0.16
NPM1-201ENST00000296930 BUD23O43709 281 aaKnown RBP16.03■□□□□ 0.16
NPM1-201ENST00000296930 UGT1A9O60656 530 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SASH3O75995 380 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 AGTP01019 485 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SFTPCP11686 197 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 TYRP1P17643 537 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 UGT1A6P19224 532 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 UGT1A1P22309 533 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 UGT1A4P22310 534 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 MAGEA4P43358 317 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 GFERP55789 205 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 DMPKQ09013 629 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 TBR1Q16650 682 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 BBS9Q3SYG4 887 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 HP1BP3Q5SSJ5 553 aaPredicted RBP16.03■□□□□ 0.16
NPM1-201ENST00000296930 AMZ2Q86W34 360 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 ZBED8Q8IZ13 594 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 NLGN4XQ8N0W4 816 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 RASGEF1AQ8N9B8 481 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 NLGN4YQ8NFZ3 816 aaPredicted RBP16.03■□□□□ 0.16
NPM1-201ENST00000296930 OR52K1Q8NGK4 314 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 CTRCQ99895 268 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 APOL2Q9BQE5 337 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 FICDQ9BVA6 458 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SLC12A9Q9BXP2 914 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SPRY4Q9C004 299 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 UGT1A7Q9HAW7 530 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 UGT1A10Q9HAW8 530 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 UGT1A8Q9HAW9 530 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 CASS4Q9NQ75 786 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 SMOXQ9NWM0 555 aa16.03■□□□□ 0.16
NPM1-201ENST00000296930 PIH1D1Q9NWS0 290 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms