RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 EBPLQ9BY08 206 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 SOX17Q9H6I2 414 aaPredicted RBP12.96□□□□□ -0.33
RUBCN-202ENST00000296343 PCDH12Q9NPG4 1184 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 CMTM6Q9NX76 183 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 SARDHQ9UL12 918 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 TMPRSS11EQ9UL52 423 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 ZNF490Q9ULM2 529 aaPredicted RBP12.96□□□□□ -0.33
RUBCN-202ENST00000296343 PSMD13Q9UNM6 376 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 RFXAPO00287 272 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.33
RUBCN-202ENST00000296343 C1QCP02747 245 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 LYNP07948 512 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 UROSP10746 265 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 BMPR1AP36894 532 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 CDKL1Q00532 357 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 ACOX1Q15067 660 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 TLR1Q15399 786 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 TPRG1Q6ZUI0 275 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 DHFR2Q86XF0 187 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 PCYOX1LQ8NBM8 494 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 JADE3Q92613 823 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 LRRC58Q96CX6 371 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 TSSK3Q96PN8 268 aa12.96□□□□□ -0.33
RUBCN-202ENST00000296343 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 KIF1CO43896 1103 aaKnown RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 BCAS2O75934 225 aaPredicted RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 MLYCDO95822 493 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 CASP9P55211 416 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 FPGSQ05932 587 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 SELPLGQ14242 412 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 MAPRE2Q15555 327 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 CDKN3Q16667 212 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 ZXDCQ2QGD7 858 aaPredicted RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 GTDC1Q4AE62 458 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 GDPD4Q6W3E5 623 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 ADAMTSL2Q86TH1 951 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 STK40Q8N2I9 435 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 NXPE3Q969Y0 559 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 VOPP1Q96AW1 172 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 MTERF1Q99551 399 aaKnown RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 SLC29A1Q99808 456 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 THEGQ9P2T0 379 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 CORO1CQ9ULV4 474 aaPredicted RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 ASPDHA6ND91 283 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 K7ESM1 405 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 WDR47O94967 919 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 LINGO3P0C6S8 592 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 DGKAP23743 735 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 SLC6A2P23975 617 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 POLR2JP52435 117 aaKnown RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 TMEM240Q5SV17 173 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 PROKR1Q8TCW9 393 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 RSPRY1Q96DX4 576 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 EGLN2Q96KS0 407 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 TMEM79Q9BSE2 394 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 MCOLN1Q9GZU1 580 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 COQ10BQ9H8M1 238 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 GPR45Q9Y5Y3 372 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 GFRA2O00451 464 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 FGF4P08620 206 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 CTSCP53634 463 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 CYP51A1Q16850 503 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 FAM174BQ3ZCQ3 159 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 RARS2Q5T160 578 aaKnown RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 AAGABQ6PD74 315 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 PHACTR4Q8IZ21 702 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 ZNF483Q8TF39 744 aaPredicted RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 ASB9Q96DX5 294 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 P2RY13Q9BPV8 354 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 POPDC3Q9HBV1 291 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 SDR39U1Q9NRG7 319 aaPredicted RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 SPATS2LQ9NUQ6 558 aaKnown RBP12.95□□□□□ -0.34
RUBCN-202ENST00000296343 ASB3Q9Y575 518 aa12.95□□□□□ -0.34
RUBCN-202ENST00000296343 LINC01553A4QN01 128 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 CCDC160A6NGH7 325 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 FXYD1O00168 92 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 ULK1O75385 1050 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 GBAP04062 536 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 GCKP35557 465 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 NNMTP40261 264 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 PTCHD3Q3KNS1 767 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 GRAMD4Q6IC98 578 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 ANKRD26P1Q6NSI1 321 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 FAM180BQ6P0A1 224 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 DOK6Q6PKX4 331 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 CERS6Q6ZMG9 384 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 GET4Q7L5D6 327 aaPredicted RBP12.94□□□□□ -0.34
RUBCN-202ENST00000296343 KIAA2013Q8IYS2 634 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
RUBCN-202ENST00000296343 RAD9AQ99638 391 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 SEZ6LQ9BYH1 1024 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 PDE10AQ9Y233 779 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 CFAP20Q9Y6A4 193 aaKnown RBP12.94□□□□□ -0.34
RUBCN-202ENST00000296343 CFAP54Q96N23 3096 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 H7C0S8 307 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 IDO1P14902 403 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 HOXB8P17481 243 aaPredicted RBP12.94□□□□□ -0.34
RUBCN-202ENST00000296343 PDHA2P29803 388 aa12.94□□□□□ -0.34
RUBCN-202ENST00000296343 PBX2P40425 430 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms