RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZBTB49Q6ZSB9 765 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 SPATA19Q7Z5L4 167 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 ADAMTSL2Q86TH1 951 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 STK40Q8N2I9 435 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 KREMEN2Q8NCW0 462 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 RHBDF1Q96CC6 855 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 ASIC4Q96FT7 647 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 ZSWIM3Q96MP5 696 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 HOPXQ9BPY8 73 aaPredicted RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 SPATA16Q9BXB7 569 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 NUSAP1Q9BXS6 441 aaKnown RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 SLC2A11Q9BYW1 496 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 IKZF5Q9H5V7 419 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 CXXC1Q9P0U4 656 aaPredicted RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 GNPTGQ9UJJ9 305 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 RAB26Q9ULW5 256 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 A0A1W2PQ67 120 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 ANTXRLA6NF34 631 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 RAD51BO15315 384 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 DFNA5O60443 496 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 EEDO75530 441 aaKnown RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 C1SP09871 688 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 PIM1P11309 404 aaPredicted RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 HMOX2P30519 316 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 GSTT1P30711 240 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 SPAM1P38567 509 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 PLOD1Q02809 727 aaPredicted RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 MESP2Q0VG99 397 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 PLPP4Q5VZY2 271 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 C22orf39Q6P5X5 142 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 LILRA6Q6PI73 481 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 DLEU7Q6UYE1 221 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 ITIH5Q86UX2 942 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 C10orf111Q8N326 155 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 FAM86B1Q8N7N1 296 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 LMNTD1Q8N9Z9 388 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 ACDQ96AP0 544 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 PBXIP1Q96AQ6 731 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 NMD3Q96D46 503 aaKnown RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 KCTD14Q9BQ13 255 aaPredicted RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 FAM126AQ9BYI3 521 aaPredicted RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 SUV39H2Q9H5I1 410 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 CCM2LQ9NUG4 571 aaPredicted RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 B4GALT6Q9UBX8 382 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 UTS2RQ9UKP6 389 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 PCDHB1Q9Y5F3 818 aa11.56□□□□□ -0.56
RHO-201ENST00000296271 MAGED1Q9Y5V3 778 aaPredicted RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 SPTBN5Q9NRC6 3674 aaKnown RBP11.56□□□□□ -0.56
RHO-201ENST00000296271 TMEM202A6NGA9 273 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 PCNAP12004 261 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 HSD17B1P14061 328 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 CD9P21926 228 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 SERPINA4P29622 427 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 SLC7A9P82251 487 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 NADK2Q4G0N4 442 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 SUSD1Q6UWL2 747 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 CERS6Q6ZMG9 384 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 ERMP1Q7Z2K6 904 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 ZFAND4Q86XD8 727 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 CHERPQ8IWX8 916 aaKnown RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 LILRA3Q8N6C8 439 aaPredicted RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 PDPRQ8NCN5 879 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 ING5Q8WYH8 240 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.55□□□□□ -0.56
RHO-201ENST00000296271 TMIGD2Q96BF3 282 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 PDLIM5Q96HC4 596 aaKnown RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 ZNF597Q96LX8 424 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 TOX2Q96NM4 488 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 GID8Q9NWU2 228 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 OAZ3Q9UMX2 235 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 OARD1Q9Y530 152 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 ANGPTL3Q9Y5C1 460 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 TRAV19A0A0A6YYK7 116 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 ABHD14A-ACY1A0A1B0GW23 586 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 TCRBV5S2A0A599 114 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 KIF1CO43896 1103 aaKnown RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 PRAMEF4O60810 478 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 METAP1P53582 386 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 PPP1R8Q12972 351 aaKnown RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 BOP1Q14137 746 aaKnown RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 SF1Q15637 639 aaKnown RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 PRAMEF9Q5VWM5 478 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 TBPL2Q6SJ96 375 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 RGL4Q8IZJ4 473 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 OR10Q1Q8NGQ4 319 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 SCRN2Q96FV2 425 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 AURKBQ96GD4 344 aaPredicted RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 UHRF1Q96T88 793 aaPredicted RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 BBS2Q9BXC9 721 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 CD244Q9BZW8 370 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 BRD9Q9H8M2 597 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 CARS2Q9HA77 564 aaKnown RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 PAPOLBQ9NRJ5 636 aaKnown RBP11.55□□□□□ -0.56
RHO-201ENST00000296271 VAPAQ9P0L0 249 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 OPTCQ9UBM4 332 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 WNT6Q9Y6F9 365 aa11.55□□□□□ -0.56
RHO-201ENST00000296271 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.54□□□□□ -0.56
RHO-201ENST00000296271 VPS4BO75351 444 aa11.54□□□□□ -0.56
RHO-201ENST00000296271 SH3BGRLO75368 114 aa11.54□□□□□ -0.56
RHO-201ENST00000296271 MOSPD3O75425 235 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms