RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PNPLA2Q96AD5 504 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TM6SF2Q9BZW4 377 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 OR10A4Q9H209 315 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CD320Q9NPF0 282 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CDH10Q9Y6N8 788 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 DISP2A7MBM2 1401 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ATP6AP2A0A1C7CYW4 349 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TRIM64CA6NLI5 447 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF726A6NNF4 738 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 DRD4P21917 467 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 NAE1Q13564 534 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 GTF2IRD2BQ6EKJ0 949 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 GTF2IRD2Q86UP8 949 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 SLC39A1Q9NY26 324 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PLEKHA6Q9Y2H5 1048 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 BTNL10A8MVZ5 291 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 H0YGN5 161 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 GRM6O15303 877 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 RPP40O75818 363 aaKnown RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 SRPRAP08240 638 aaKnown RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 HDCP19113 662 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 CRHR1P34998 444 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 PPATQ06203 517 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 DUSP4Q13115 394 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 ARSKQ6UWY0 536 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 GPAT4Q86UL3 456 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 HSFY1Q96LI6 401 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 DHX33Q9H6R0 707 aaKnown RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 RNF121Q9H920 327 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 BRD7Q9NPI1 651 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 SNTG1Q9NSN8 517 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 FAM105AQ9NUU6 356 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 TMEM184CQ9NVA4 438 aa8.62□□□□□ -1.03
NIPBL-201ENST00000282516 POLR3BQ9NW08 1133 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-201ENST00000282516 LOC100509620A0A075B734 347 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 IFNA1P01562 189 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SPARCP09486 303 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ANXA3P12429 323 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 NT5EP21589 574 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 IDSP22304 550 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 MRPS6P82932 125 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SLC13A2Q13183 592 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 RNASEH2BQ5TBB1 312 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 OR4C15Q8NGM1 316 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 HDAC10Q969S8 669 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 GTPBP2Q9BX10 602 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PCDH10Q9P2E7 1040 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 BORCS7-ASMTA0A0B4J1R7 106 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 LYPLA1O75608 230 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CTPS1P17812 591 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 XKRXQ6PP77 449 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 GALNT15Q8N3T1 639 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ATAD1Q8NBU5 361 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 OR5J2Q8NH18 312 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 VWA7Q9Y334 891 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SASH3O75995 380 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 VNN2O95498 520 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 HOXC8P31273 242 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SPAM1P38567 509 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 BBS12Q6ZW61 710 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PAQR7Q86WK9 346 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 C1orf109Q9NX04 203 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 TMPRSS11EQ9UL52 423 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PCDHGB6Q9Y5F9 930 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 MDFIC2A0A1B0GVS7 189 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF878C9JN71 531 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CFL1P23528 166 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PLA2G4EQ3MJ16 856 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 MINDY4Q4G0A6 757 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 TMEM119Q4V9L6 283 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PRAMEF18Q5VWM3 479 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PCDH18Q9HCL0 1135 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PTCH2Q9Y6C5 1203 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 PRRC2BQ5JSZ5 2229 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CAPN14A8MX76 684 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SLC16A8O95907 504 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CALCAP01258 141 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 VIPP01282 170 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 GTF2H2Q13888 395 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 METTL21CQ5VZV1 264 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 GTF2H2CQ6P1K8 395 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 YIPF7Q8N8F6 280 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CHST7Q9NS84 486 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CFAP97Q9P2B7 532 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 M0QX08 132 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SEPT4O43236 478 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 VAMP1P23763 118 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 CD40LGP29965 261 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 MAB21L1Q13394 359 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 MAD2L1BPQ15013 274 aaPredicted RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 GTPBP3Q969Y2 492 aaKnown RBP8.61□□□□□ -1.03
NIPBL-201ENST00000282516 TSSK3Q96PN8 268 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 FUZQ9BT04 418 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 FBXO5Q9UKT4 447 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 F8VP50 259 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 EML1O00423 815 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 ALPPP05187 535 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 COL6A2P12110 1019 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 LCN1P31025 176 aa8.61□□□□□ -1.03
NIPBL-201ENST00000282516 SLC9A3P48764 834 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms