RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 HNRNPDQ14103 355 aaKnown RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 CCL15Q16663 113 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 BMT2Q1RMZ1 405 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 MCMDC2Q4G0Z9 681 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 TIGD2Q4W5G0 525 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ZNF789Q5FWF6 425 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 XKR3Q5GH77 459 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 CFAP157Q5JU67 520 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 MIIPQ5JXC2 388 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ARHGAP40Q5TG30 622 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 FAM91A1Q658Y4 838 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ANKRD40Q6AI12 368 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SLC9A4Q6AI14 798 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 RAET1GQ6H3X3 334 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 TMEM81Q6P7N7 255 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 FBXO46Q6PJ61 603 aaPredicted RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 CES3Q6UWW8 571 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 GLDNQ6ZMI3 551 aaPredicted RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 MTSS1LQ765P7 747 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SPATA21Q7Z572 469 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 GGNQ86UU5 652 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SLC22A9Q8IVM8 553 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 PM20D2Q8IYS1 436 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 OR4N4Q8N0Y3 316 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ABRAQ8N0Z2 381 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ZNF276Q8N554 614 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 MCUQ8NE86 351 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SLC24A4Q8NFF2 622 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 REPS2Q8NFH8 660 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 OR52N2Q8NGI0 321 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 EXOC6Q8TAG9 804 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ACTRT2Q8TDY3 377 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ZNF483Q8TF39 744 aaPredicted RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 SYN2Q92777 582 aaPredicted RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 INPP5DQ92835 1189 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 DNASE1L2Q92874 299 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ARRDC3Q96B67 414 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 PHF21BQ96EK2 531 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 C14orf79Q96F83 325 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 DHTKD1Q96HY7 919 aaPredicted RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 REXO5Q96IC2 774 aaKnown RBP4.54□□□□□ -1.68
CD44-202ENST00000278385 USP28Q96RU2 1077 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SLC46A2Q9BY10 475 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 GPR61Q9BZJ8 451 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 P2RY12Q9H244 342 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 IKZF4Q9H2S9 585 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 HRH4Q9H3N8 390 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 HAUS4Q9H6D7 363 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ECT2Q9H8V3 914 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 KLC4Q9NSK0 619 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 OLAHQ9NV23 265 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.54□□□□□ -1.68
CD44-202ENST00000278385 HAO2Q9NYQ3 351 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 IL20Q9NYY1 176 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 ERAP1Q9NZ08 941 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 HSPB7Q9UBY9 170 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 TRIM10Q9UDY6 481 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 VPS51Q9UID3 782 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 CARD8Q9Y2G2 431 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 MAB21L2Q9Y586 359 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 GMEB1Q9Y692 573 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 CDY1Q9Y6F8 540 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 MYH3P11055 1940 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 TRPM7Q96QT4 1865 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 THSD7BQ9C0I4 1608 aa4.54□□□□□ -1.68
CD44-202ENST00000278385 SSC5DA1L4H1 1573 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 GXYLT2A0PJZ3 443 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 CFAP73A6NFT4 308 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 MBD3L5A6NJ08 208 aaPredicted RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 CXorf49A8MYA2 514 aaPredicted RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 EIF3CLB5ME19 914 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 NPIPB8E9PQR5 432 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 M0QYG6 137 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 PSMD9O00233 223 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 RNASET2O00584 256 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 PER2O15055 1255 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 HS6ST1O60243 411 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 FAM20BO75063 409 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 USP12O75317 370 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 RHBDL1O75783 438 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 OR6B1O95007 311 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 FSHBP01225 129 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 ZNF3P17036 446 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 CTPS1P17812 591 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 ACP1P24666 158 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 PTBP1P26599 531 aaKnown RBP eCLIP4.53□□□□□ -1.68
CD44-202ENST00000278385 PON1P27169 355 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 BMI1P35226 326 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 LONP1P36776 959 aaKnown RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 RABGGTBP53611 331 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
CD44-202ENST00000278385 TNFRSF17Q02223 184 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 GOLGA8FQ08AF8 430 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 OLIG2Q13516 323 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 GIT2Q14161 759 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 LPIN1Q14693 890 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 PTPAQ15257 358 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 RCN1Q15293 331 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 CRB2Q5IJ48 1285 aa4.53□□□□□ -1.68
CD44-202ENST00000278385 CACHD1Q5VU97 1274 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms