RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 UBXN10Q96LJ8 280 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 ZNF570Q96NI8 536 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 RNF11Q9Y3C5 154 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 C16orf96A6NNT2 1141 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 UPK3BL1B0FP48 263 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 UPK3BL2E5RIL1 263 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 WNT9AO14904 365 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 CLDN9O95484 217 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 LATS1O95835 1130 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 ATP1B2P14415 290 aaPredicted RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 NELFEP18615 380 aaKnown RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 ATP6V1B2P21281 511 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 GDI1P31150 447 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 ALDH9A1P49189 494 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 SLC7A9P82251 487 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 MRPS35P82673 323 aaKnown RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 LRRC74AQ0VAA2 488 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 SULT1C3Q6IMI6 304 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 SPRED2Q7Z698 418 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 TMPRSS11BQ86T26 416 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 PQLC1Q8N2U9 271 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 FLCNQ8NFG4 579 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 PIH1D2Q8WWB5 315 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 OR52E6Q96RD3 313 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 EBPLQ9BY08 206 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 LRTM1Q9HBL6 345 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 CFAP20Q9Y6A4 193 aaKnown RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 PRSS21Q9Y6M0 314 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 K7EPI3 171 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 KPNA5O15131 536 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 HSPA1AP0DMV8 641 aaKnown RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 HSPA1BP0DMV9 641 aaKnown RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 ETS2P15036 469 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 DNAJB1P25685 340 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 ACRV1P26436 265 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 PRDX6P30041 224 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 RPL26P61254 145 aaKnown RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 CHRNB3Q05901 458 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 MAD2L1Q13257 205 aaPredicted RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 COL9A2Q14055 689 aaPredicted RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 PHKG1Q16816 387 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 PTCHD3Q3KNS1 767 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 TCEAL5Q5H9L2 206 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 VPS37AQ8NEZ2 397 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 RHEBL1Q8TAI7 183 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 SPPL3Q8TCT6 385 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 C3orf30Q96M34 536 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 ZSWIM3Q96MP5 696 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 GPR78Q96P69 363 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 RETREG1Q9H6L5 497 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 WBP1LQ9NX94 342 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 INTS6Q9UL03 887 aaKnown RBP8.84□□□□□ -0.99
SEC16A-201ENST00000277537 INVSQ9Y283 1065 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 ORC6Q9Y5N6 252 aa8.84□□□□□ -0.99
SEC16A-201ENST00000277537 TBC1D3DA0A087WVF3 549 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3IA0A087WXS9 549 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3EA0A087X179 549 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3KA0A087X1G2 549 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3FA6NER0 549 aaPredicted RBP8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3LB9A6J9 549 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 H3BNC9 293 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 GSRP00390 522 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3HP0C7X1 549 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 DDX6P26196 483 aaKnown RBP eCLIP8.83□□□□□ -1
SEC16A-201ENST00000277537 TIE1P35590 1138 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3GQ6DHY5 549 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3CQ6IPX1 549 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 PHYKPLQ8IUZ5 450 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TBC1D3Q8IZP1 549 aaPredicted RBP8.83□□□□□ -1
SEC16A-201ENST00000277537 GPR150Q8NGU9 434 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 DNAJC11Q9NVH1 559 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 HSFX1Q9UBD0 423 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 KCNE2Q9Y6J6 123 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 ATG2BQ96BY7 2078 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 TRBV23OR9-2A0A075B6M9 112 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 KRT87PA6NCN2 255 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 RFXAPO00287 272 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 CASQ2O14958 399 aaPredicted RBP8.83□□□□□ -1
SEC16A-201ENST00000277537 SMNDC1O75940 238 aaKnown RBP eCLIP8.83□□□□□ -1
SEC16A-201ENST00000277537 ACADMP11310 421 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 COX7A2P14406 83 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 ATP6V1C1P21283 382 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 VIPR1P32241 457 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 MAGEA12P43365 314 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 RAP1GDS1P52306 607 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 EIF4EBP2Q13542 120 aaPredicted RBP8.83□□□□□ -1
SEC16A-201ENST00000277537 FAM174BQ3ZCQ3 159 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 MTX3Q5HYI7 312 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 WLSQ5T9L3 541 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 ZFP1Q6P2D0 407 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 KIAA1324Q6UXG2 1013 aaKnown RBP8.83□□□□□ -1
SEC16A-201ENST00000277537 RAB42Q8N4Z0 105 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 OR14C36Q8NHC7 312 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 MAGEC3Q8TD91 643 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 PRPF18Q99633 342 aaKnown RBP8.83□□□□□ -1
SEC16A-201ENST00000277537 CIB1Q99828 191 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 KXD1Q9BQD3 176 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 CENPKQ9BS16 269 aa8.83□□□□□ -1
SEC16A-201ENST00000277537 C1orf21Q9H246 121 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms