RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 COMMD3-BMI1R4GMX3 469 aa12.69□□□□□ -0.38
CPSF6-201ENST00000266679 DENND4CQ5VZ89 1909 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 KIAA1671Q9BY89 1806 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 GLYATL1P3A0A0U1RQE8 302 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 TAPBPO15533 448 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 G6PDP11413 515 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 BPIP17213 487 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 FASP25445 335 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 ACRV1P26436 265 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CLCN2P51788 898 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 EEFSECP57772 596 aaKnown RBP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 LMAN2Q12907 356 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 TRAF3Q13114 568 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 ABRAXAS2Q15018 415 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CCDC85BQ15834 202 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CYP20A1Q6UW02 462 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 TSPAN33Q86UF1 283 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 ZSWIM9Q86XI8 627 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CMTR2Q8IYT2 770 aaKnown RBP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 ZBTB2Q8N680 514 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 PDPRQ8NCN5 879 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CCT7Q99832 543 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CAAP1Q9H8G2 361 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 IL26Q9NPH9 171 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 MRPL17Q9NRX2 175 aaKnown RBP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 WWOXQ9NZC7 414 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 LSM7Q9UK45 103 aaKnown RBP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 ST14Q9Y5Y6 855 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 PIKFYVEQ9Y2I7 2098 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 PLXNB3Q9ULL4 1909 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 TCRBV5S2A0A599 114 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 FFAR3O14843 346 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 LSM1O15116 133 aaKnown RBP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 VILLO15195 856 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 GPR42O15529 346 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 BNIP3LO60238 219 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 IGSF6O95976 241 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 GLUD1P00367 558 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 OTCP00480 354 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 MT-ND1P03886 318 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CKMP06732 381 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 GPIP06744 558 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 IGFBP4P22692 258 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 GABRR2P28476 465 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 CD70P32970 193 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 RFC2P35250 354 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 DGKQP52824 942 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 PLIN5Q00G26 463 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 PRKG2Q13237 762 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 PHKG1Q16816 387 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 NANOGP8Q6NSW7 305 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 MILR1Q7Z6M3 343 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 RALGPS2Q86X27 583 aaPredicted RBP12.68□□□□□ -0.38
CPSF6-201ENST00000266679 BBS7Q8IWZ6 715 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 PPM1MQ96MI6 270 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 MUC13Q9H3R2 512 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 NANOGQ9H9S0 305 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 OARD1Q9Y530 152 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 ANGPTL3Q9Y5C1 460 aa12.68□□□□□ -0.38
CPSF6-201ENST00000266679 EPOPA6NHQ4 379 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 RSL1D1O76021 490 aaKnown RBP12.67□□□□□ -0.38
CPSF6-201ENST00000266679 OLFM2O95897 454 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 SPAM1P38567 509 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 GDF5P43026 501 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 OR4D2P58180 307 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 WDR5P61964 334 aaKnown RBP12.67□□□□□ -0.38
CPSF6-201ENST00000266679 RPL38P63173 70 aaKnown RBP12.67□□□□□ -0.38
CPSF6-201ENST00000266679 EMX2Q04743 252 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 SELPLGQ14242 412 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 ATP6AP1Q15904 470 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 AP5B1Q2VPB7 878 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 SPATS1Q496A3 300 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 NHSL2Q5HYW2 709 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 MBOAT1Q6ZNC8 495 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 TCEAL8Q8IYN2 117 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 HS6ST3Q8IZP7 471 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 TSPAN14Q8NG11 270 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 DGCR14Q96DF8 476 aaKnown RBP12.67□□□□□ -0.38
CPSF6-201ENST00000266679 ACTL8Q9H568 366 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 ATP13A3Q9H7F0 1226 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 VCX3AQ9NNX9 186 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 PNPLA3Q9NST1 481 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 ANAPC2Q9UJX6 822 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 PTBP2Q9UKA9 531 aaKnown RBP12.67□□□□□ -0.38
CPSF6-201ENST00000266679 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
CPSF6-201ENST00000266679 GJA1P17302 382 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 DGKAP23743 735 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 HRH2P25021 359 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 CTSOP43234 321 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 STK19P49842 368 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 MTPNP58546 118 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 CREB5Q02930 508 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 CDKN3Q16667 212 aa12.66□□□□□ -0.38
CPSF6-201ENST00000266679 RFTN2Q52LD8 501 aaPredicted RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 INTS11Q5TA45 600 aaKnown RBP12.66□□□□□ -0.38
CPSF6-201ENST00000266679 CNKSR3Q6P9H4 555 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms