RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ADAMTS5Q9UNA0 930 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 RUVBL1Q9Y265 456 aaKnown RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 INSL5Q9Y5Q6 135 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 NFS1Q9Y697 457 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 EME2A4GXA9 379 aaPredicted RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 PI15O43692 258 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 PEX2P28328 305 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 ERVK-8P63133 956 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 GPM6BQ13491 265 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 Q6ZVU0 165 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 CYP2U1Q7Z449 544 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 PIM3Q86V86 326 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 ZNF671Q8TAW3 534 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 ZHX1-C8orf76Q96EF9 292 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 TMEM209Q96SK2 561 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 KLF11O14901 512 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 ZNF623O75123 536 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 BEST1O76090 585 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 DBTP11182 482 aaKnown RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 PRG2P13727 222 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 NCK1P16333 377 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 IGFBP5P24593 272 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 CTSKP43235 329 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 C6orf52Q5T4I8 152 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 C14orf80Q86SX3 495 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 PYCR2Q96C36 320 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 CDK15Q96Q40 435 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 RBM4BQ9BQ04 359 aaKnown RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 KIFC1Q9BW19 673 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 RBM4Q9BWF3 364 aaKnown RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 SMPD3Q9NY59 655 aaPredicted RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 C10orf71Q711Q0 1435 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 SCAMP1O15126 338 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 FANCGO15287 622 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 PRAMEF11O60813 436 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 SLC5A9Q2M3M2 681 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 AMZ2Q86W34 360 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 RELL1Q8IUW5 271 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 GPR135Q8IZ08 494 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 LRTOMTQ8WZ04 291 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 MCCC1Q96RQ3 725 aaPredicted RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 RIOK2Q9BVS4 552 aaKnown RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 PDLIM7Q9NR12 457 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 EVA1BQ9NVM1 165 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 OSER1Q9NX31 292 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 WASF2Q9Y6W5 498 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 CCDC189A1A4V9 331 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 MAGEB17A8MXT2 336 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 MTX2O75431 263 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 FABP3P05413 133 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 GALTP07902 379 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 EFNA1P20827 205 aaPredicted RBP13.77□□□□□ -0.2
CDH3-201ENST00000264012 JAK1P23458 1154 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 BRAT1Q6PJG6 821 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 CAND1Q86VP6 1230 aaKnown RBP13.77□□□□□ -0.2
CDH3-201ENST00000264012 HEATR4Q86WZ0 1026 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 KBTBD8Q8NFY9 601 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 ENKURQ8TC29 256 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 OR52B2Q96RD2 323 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 BRINP2Q9C0B6 783 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 HAPLN2Q9GZV7 340 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 ATXN10Q9UBB4 475 aa13.77□□□□□ -0.2
CDH3-201ENST00000264012 FAM72CH0Y354 149 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 KDELR3O43731 214 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 SOD2P04179 222 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 RPS9P46781 194 aaKnown RBP13.77□□□□□ -0.21
CDH3-201ENST00000264012 ITGADQ13349 1161 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 SNAP47Q5SQN1 464 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 FAM72AQ5TYM5 149 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 CWF19L1Q69YN2 538 aaKnown RBP13.77□□□□□ -0.21
CDH3-201ENST00000264012 FAM72DQ6L9T8 149 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 TAF8Q7Z7C8 310 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 FAM72BQ86X60 149 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 ARL10Q8N8L6 244 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 KLK6Q92876 244 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 CRISPLD1Q9H336 500 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 TDP1Q9NUW8 608 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 EHD3Q9NZN3 535 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 RAB26Q9ULW5 256 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 PSAT1Q9Y617 370 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 AHDC1Q5TGY3 1603 aaPredicted RBP13.77□□□□□ -0.21
CDH3-201ENST00000264012 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 UGT2B11O75310 529 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 TULP3O75386 442 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 CLDN7O95471 211 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 SEC24AO95486 1093 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 CLK3P49761 638 aaKnown RBP13.77□□□□□ -0.21
CDH3-201ENST00000264012 WNT7BP56706 349 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 SRSF11Q05519 484 aaKnown RBP13.77□□□□□ -0.21
CDH3-201ENST00000264012 PDGFRLQ15198 375 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 TOMM20Q15388 145 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 ADGRG2Q8IZP9 1017 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 HDDC3Q8N4P3 179 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 SMYD1Q8NB12 490 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 CYB5D2Q8WUJ1 264 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 SUCOQ9UBS9 1254 aaKnown RBP13.77□□□□□ -0.21
CDH3-201ENST00000264012 TRPS1Q9UHF7 1281 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 MYH13Q9UKX3 1938 aa13.77□□□□□ -0.21
CDH3-201ENST00000264012 FAM234BA2RU67 622 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms