RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 COPZ1P61923 177 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 NRG1Q02297 640 aaPredicted RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 LAPTM5Q13571 262 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 TSNQ15631 228 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 NKG7Q16617 165 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 SCIMPQ6UWF3 145 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 USP43Q70EL4 1123 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 FAM86B1Q8N7N1 296 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 GLB1L3Q8NCI6 653 aaPredicted RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 OR10A6Q8NH74 314 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 SLC13A3Q8WWT9 602 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 RASSF5Q8WWW0 418 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 FUBP1Q96AE4 644 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 SENP8Q96LD8 212 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 ACOX2Q99424 681 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 ITPAQ9BY32 194 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 ALOXE3Q9BYJ1 711 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 NACA2Q9H009 215 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 QTRT2Q9H974 415 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 CSNK1G1Q9HCP0 422 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 DKK3Q9UBP4 350 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 PCDHB14Q9Y5E9 798 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 GMPPBQ9Y5P6 360 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 A0A1B0GTL3 188 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 METTL15A6NJ78 407 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 KCNK2O95069 426 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 SNX4O95219 450 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 PRKACGP22612 351 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 PCSK1P29120 753 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 FMO3P31513 532 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 BMPR1AP36894 532 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 PPP3CCP48454 512 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 STC1P52823 247 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 MAD2L1Q13257 205 aaPredicted RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 CAMK2BQ13554 666 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 ZNF544Q6NX49 715 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 PAQR3Q6TCH7 311 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 Q6ZSR9 355 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 TSPYL5Q86VY4 417 aaPredicted RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 CLIP4Q8N3C7 705 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 SH3RF2Q8TEC5 729 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 NCLNQ969V3 563 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 RHBDF1Q96CC6 855 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 PPP3R2Q96LZ3 170 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 MROH8Q9H579 483 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 CCDC177Q9NQR7 707 aaPredicted RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 EXD2Q9NVH0 621 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 OPTCQ9UBM4 332 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 ZNF221Q9UK13 617 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 PIN4Q9Y237 131 aaKnown RBP12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 INVSQ9Y283 1065 aa12.19□□□□□ -0.46
CHMP2B-201ENST00000263780 LOC285095A0A1B0GVY8 99 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 MYBPHLA2RUH7 354 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 CCL22O00626 93 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 HAT1O14929 419 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 AXIN1O15169 862 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 GPR32O75388 356 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 CNMDO75829 334 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 FADS2O95864 444 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 FGF1P05230 155 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 G6PDP11413 515 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 HLA-DPA1P20036 260 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 PRDX3P30048 256 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 NR4A2P43354 598 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 NRIP1P48552 1158 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 SCNN1GP51170 649 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 RABGGTBP53611 331 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 EIF4EBP2Q13542 120 aaPredicted RBP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 PON2Q15165 354 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 MAPKAPK3Q16644 382 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 TYSND1Q2T9J0 566 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 SMU1Q2TAY7 513 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 COLEC12Q5KU26 742 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 UBE2UQ5VVX9 321 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 ATG9BQ674R7 924 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 TTC23LQ6PF05 361 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 PNPLA1Q8N8W4 532 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 KBTBD8Q8NFY9 601 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 PYURFQ96I23 114 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 RIBC2Q9H4K1 309 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 GALPQ9UBC7 116 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 RAPGEFL1Q9UHV5 662 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 MKLN1Q9UL63 735 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 VPS9D1Q9Y2B5 631 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 OR2A25A4D2G3 310 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 A8MU76 341 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 E9PAM4 449 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 BTN3A1O00481 513 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 TPD52L2O43399 206 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 AIREO43918 545 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 DFNA5O60443 496 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 CREG1O75629 220 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 OR4F21O95013 312 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 PARNO95453 639 aaKnown RBP12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 IL6P05231 212 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 MASP1P48740 699 aa12.18□□□□□ -0.46
CHMP2B-201ENST00000263780 SEPHS1P49903 392 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms