RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 TMEM26Q6ZUK4 368 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 GALNT7Q86SF2 657 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 CNTN4Q8IWV2 1026 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 TMEM74Q96NL1 305 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 INSM2Q96T92 566 aaPredicted RBP18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 SLC40A1Q9NP59 571 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 NEUROG3Q9Y4Z2 214 aa18.33■□□□□ 0.53
CYSTM1-201ENST00000261811 SLC5A10A0PJK1 596 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 NTN3O00634 580 aaPredicted RBP18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 AOAHP28039 575 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 FASTKD3Q14CZ7 662 aaKnown RBP18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 PLCL1Q15111 1095 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 TRADDQ15628 312 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 PLEKHS1Q5SXH7 462 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 UGT3A1Q6NUS8 523 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 C3orf62Q6ZUJ4 267 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 PDZD3Q86UT5 571 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 UNC5BQ8IZJ1 945 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 TFGQ92734 400 aaPredicted RBP18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 BIRC8Q96P09 236 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 FMO2Q99518 471 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 SCNM1Q9BWG6 230 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 OR52A5Q9H2C5 316 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 MVB12BQ9H7P6 319 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 TXNDC16Q9P2K2 825 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 RABGEF1Q9UJ41 708 aa18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 CORO1CQ9ULV4 474 aaPredicted RBP18.32■□□□□ 0.52
CYSTM1-201ENST00000261811 IGHV1OR21-1A0A087WYE8 117 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 IQCF5A8MTL0 148 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 VPS26AO75436 327 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 AMD1P17707 334 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 CCR7P32248 378 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 DEKP35659 375 aaKnown RBP18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 PREPP48147 710 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 ZNF658BQ4V348 819 aaPredicted RBP18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 CTSL3PQ5NE16 218 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 TEDDM1Q5T9Z0 273 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 CDCP2Q5VXM1 449 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 CYS1Q717R9 158 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 SLC26A11Q86WA9 606 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 KRT222Q8N1A0 295 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 LILRA3Q8N6C8 439 aaPredicted RBP18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 KCNJ9Q92806 393 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 RMDN2Q96LZ7 410 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 FOPNLQ96NB1 174 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 FERD3LQ96RJ6 166 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 STRADBQ9C0K7 418 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 ZDHHC18Q9NUE0 388 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 MOCS1Q9NZB8 636 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 POLG2Q9UHN1 485 aa18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 CFAP20Q9Y6A4 193 aaKnown RBP18.31■□□□□ 0.52
CYSTM1-201ENST00000261811 MED19A0JLT2 244 aaPredicted RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 D6RAR5 112 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 B4GAT1O43505 415 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 HAUS5O94927 633 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 RHOXF2BP0C7M4 288 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 PDHA2P29803 388 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 STX2P32856 288 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 PHBP35232 272 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 SKIV2L2P42285 1042 aaKnown RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 MAPK9P45984 424 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 CSE1LP55060 971 aaKnown RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 SHC2P98077 582 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 MPP1Q00013 466 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 SQSTM1Q13501 440 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 GPR18Q14330 331 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 TTC23LQ6PF05 361 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 CAPN12Q6ZSI9 719 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 SLC22A15Q8IZD6 547 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 DCBLD1Q8N8Z6 715 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 SPDYE1Q8NFV5 336 aaPredicted RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 SKA2Q8WVK7 121 aaPredicted RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 C9orf72Q96LT7 481 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 RHOXF2Q9BQY4 288 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 WDR83Q9BRX9 315 aaKnown RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 TRIT1Q9H3H1 467 aaKnown RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 LATS2Q9NRM7 1088 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 AKAP7Q9P0M2 348 aaPredicted RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 KLHL42Q9P2K6 505 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 ASF1AQ9Y294 204 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 PCM1Q15154 2024 aa18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 COL27A1Q8IZC6 1860 aaPredicted RBP18.3■□□□□ 0.52
CYSTM1-201ENST00000261811 A0A1W2PQM1 296 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 FAM221BA6H8Z2 402 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 BHMG1C9JSJ3 638 aaPredicted RBP18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 NIPSNAP2O75323 286 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 CSO75390 466 aaKnown RBP18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 GPC4O75487 556 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 UBXN7O94888 489 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 SLCO2B1O94956 709 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 CD1CP29017 333 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 SSTR1P30872 391 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 INHBCP55103 352 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 TARDBPQ13148 414 aaKnown RBP eCLIP18.29■□□□□ 0.525e-6■■■■□ 20
CYSTM1-201ENST00000261811 ZNF789Q5FWF6 425 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 TRMT10BQ6PF06 316 aaKnown RBP18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 CNSTQ6PJW8 725 aa18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 WDR74Q6RFH5 385 aaPredicted RBP18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 ZNF761Q86XN6 746 aaPredicted RBP18.29■□□□□ 0.52
CYSTM1-201ENST00000261811 PLXDC1Q8IUK5 500 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms