RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 GANABQ14697 944 aaKnown RBP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 MYBPC3Q14896 1274 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 PTGES3Q15185 160 aaKnown RBP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 UBE2J2Q8N2K1 259 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 CLEC4DQ8WXI8 215 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 C11orf24Q96F05 449 aaPredicted RBP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 C12orf66Q96MD2 445 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 CHMP1AQ9HD42 196 aaPredicted RBP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL8A1-201ENST00000261037 FBXW11Q9UKB1 542 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 AXIN1O15169 862 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 ACTR3P61158 418 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 AKAP14Q86UN6 197 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 RAPGEFL1Q9UHV5 662 aa11.94□□□□□ -0.5
COL8A1-201ENST00000261037 AREL1O15033 823 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 WFS1O76024 890 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 SCGNO76038 276 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CCNB2O95067 398 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CEBPGP53567 150 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 MTPNP58546 118 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 PRKCZQ05513 592 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 DLK2Q6UY11 383 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 TMC8Q8IU68 726 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CLCC1Q96S66 551 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CHCHD6Q9BRQ6 235 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 MAGEB17A8MXT2 336 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CHST10O43529 356 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 SLC35G6P0C7Q6 338 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 NDST2P52849 883 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 AMZ1Q400G9 498 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CYP2U1Q7Z449 544 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 SLC38A3Q99624 504 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 GSDMCQ9BYG8 508 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 ERVW-1Q9UQF0 538 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 AKAP12Q02952 1782 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 ZNF879B4DU55 563 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 SYN3O14994 580 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 INHAP05111 366 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 AHCYP23526 432 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 ALDH4A1P30038 563 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 RNF220Q5VTB9 566 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 STX12Q86Y82 276 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CHERPQ8IWX8 916 aaKnown RBP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 MPP5Q8N3R9 675 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CBR4Q8N4T8 237 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 PIGXQ8TBF5 258 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 DIRAS2Q96HU8 199 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 LENG8Q96PV6 779 aaPredicted RBP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 YIPF4Q9BSR8 244 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 MTRRQ9UBK8 725 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 PHF24Q9UPV7 400 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CLDN4O14493 209 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 LYNP07948 512 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 DAOAP59103 153 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 SP2Q02086 613 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 TAF1AQ15573 450 aaPredicted RBP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CCL14Q16627 93 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 C7orf26Q96N11 449 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 TBX5Q99593 518 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 TBC1D17Q9HA65 648 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 ING3Q9NXR8 418 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 C2CD4BA6NLJ0 364 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 SRRM3A6NNA2 597 aaPredicted RBP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 YJEFN3A6XGL0 299 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 E7ENX8 843 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 RSL1D1O76021 490 aaKnown RBP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 TM7SF2O76062 418 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 TBX18O95935 607 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 AZGP1P25311 298 aaKnown RBP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 PCBP2Q15366 365 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 LBX2Q6XYB7 198 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 CPNE8Q86YQ8 564 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 PGAM4Q8N0Y7 254 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 MAGEH1Q9H213 219 aa11.93□□□□□ -0.5
COL8A1-201ENST00000261037 MRPS30Q9NP92 439 aaKnown RBP11.93□□□□□ -0.5
COL8A1-201ENST00000261037 RGS20O76081 388 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 SDC2P34741 201 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 GALK1P51570 392 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 HSF2Q03933 536 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 ILF3Q12906 894 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 XKR4Q5GH76 650 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 GDF6Q6KF10 455 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 TAPBPLQ9BX59 468 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 PLEKHA1Q9HB21 404 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 RBMX2Q9Y388 322 aaKnown RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 PARP4Q9UKK3 1724 aaKnown RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 CXCR6O00574 342 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 C8AP07357 584 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 ALPIP09923 528 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 SNHG28P0DPA3 235 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 ZNF8P17098 575 aaPredicted RBP11.92□□□□□ -0.5
COL8A1-201ENST00000261037 TIE1P35590 1138 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 ARHGDIBP52566 201 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 SMU1Q2TAY7 513 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 OR13C4Q8NGS5 318 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 SLC35G5Q96KT7 338 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 PHF12Q96QT6 1004 aa11.92□□□□□ -0.5
COL8A1-201ENST00000261037 WDR12Q9GZL7 423 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms