RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 FAM102BQ5T8I3 360 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 INTS11Q5TA45 600 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 B3GNT9Q6UX72 402 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ALYREFQ86V81 257 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 KLHL36Q8N4N3 616 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 OR56B2PQ8NGI1 322 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NRG4Q8WWG1 115 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FCGR1BQ92637 280 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 TRIM2Q9C040 744 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 OPN3Q9H1Y3 402 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ITM2CQ9NQX7 267 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ENOPH1Q9UHY7 261 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 KIAA1024Q9UPX6 916 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 LILRB3O75022 631 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 METTL18O95568 372 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 RAC2P15153 192 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CASP1P29466 404 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MRPS10P82664 201 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MAP4K2Q12851 820 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CBLBQ13191 982 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SELENBP1Q13228 472 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 DDX39BQ13838 428 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 THEM4Q5T1C6 240 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CERCAMQ5T4B2 595 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF671Q8TAW3 534 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 C5orf34Q96MH7 638 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NACC1Q96RE7 527 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ACTL8Q9H568 366 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NUFIP1Q9UHK0 495 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ABT1Q9ULW3 272 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SAMHD1Q9Y3Z3 626 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 KANTRA0A1W2PQU2 76 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC9B1P1A6NJY1 282 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 INPP4BO15327 924 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PAPSS2O95340 614 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FDX1P10109 184 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ALDH3A2P51648 485 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ARSEP51690 589 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CDH13P55290 713 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 RAB33AQ14088 237 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 UBE2SQ16763 222 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 XKR3Q5GH77 459 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MOXD1Q6UVY6 613 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM217AQ8IXS0 508 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 TRAM1L1Q8N609 369 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ADPGKQ9BRR6 497 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 IL25Q9H293 177 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NT5MQ9NPB1 228 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CREBZFQ9NS37 354 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NINJ2Q9NZG7 142 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ANAPC7Q9UJX3 599 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PRRT4C9JH25 899 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FANCGO15287 622 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MID1O15344 667 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 HMBSP08397 361 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 RPS5P46782 204 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 CACNB2Q08289 660 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 DRAP1Q14919 205 aaPredicted RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 HACD4Q5VWC8 232 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NANOGP8Q6NSW7 305 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 EEPD1Q7L9B9 569 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PEG10Q86TG7 708 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 FBXL16Q8N461 479 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 ANKLE1Q8NAG6 615 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC35G2Q8TBE7 412 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 NXPE2Q96DL1 559 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM80Q96HE8 168 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 B3GNT4Q9C0J1 378 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 MRPL22Q9NWU5 206 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 DIMT1Q9UNQ2 313 aaKnown RBP6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 LYVE1Q9Y5Y7 322 aa6.66□□□□□ -1.34
PDGFRA-201ENST00000257290 PCDHGA12O60330 932 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 GLRA3O75311 464 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 ZBTB7AO95365 584 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 PLA2G4BP0C869 781 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF25P17030 456 aaPredicted RBP6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 PSMC5P62195 406 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 BLOC1S1P78537 153 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 ORC1Q13415 861 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 UBAP2LQ14157 1087 aaKnown RBP6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM214AQ32MH5 1076 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 NKAPLQ5M9Q1 402 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 CDC42EP5Q6NZY7 148 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 PDXDC2PQ6P474 469 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 RTL10Q7L3V2 364 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 DPP9Q86TI2 863 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 SYVN1Q86TM6 617 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 TAC4Q86UU9 113 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 FAM131BQ86XD5 332 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 CBR4Q8N4T8 237 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC44A5Q8NCS7 719 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 DDX1Q92499 740 aaKnown RBP6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC41A3Q96GZ6 507 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 PAFAH2Q99487 392 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 EDEM2Q9BV94 578 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 C1orf21Q9H246 121 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 DSN1Q9H410 356 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 FOLH1BQ9HBA9 442 aa6.65□□□□□ -1.34
PDGFRA-201ENST00000257290 TMEM248Q9NWD8 314 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms