RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SYTL3Q4VX76 610 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 CDKL4Q5MAI5 379 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 ANO7Q6IWH7 933 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 RPS27LQ71UM5 84 aaKnown RBP9.27□□□□□ -0.93
NIP7-202ENST00000254941 RASGRP3Q8IV61 690 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 SLC22A15Q8IZD6 547 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 PGBD3Q8N328 593 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 DENND6BQ8NEG7 585 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 OR2L2Q8NH16 312 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 MARVELD3Q96A59 401 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 RMDN2Q96LZ7 410 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 ASB2Q96Q27 587 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 SLC12A9Q9BXP2 914 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 EML4Q9HC35 981 aaKnown RBP9.27□□□□□ -0.93
NIP7-202ENST00000254941 PHPT1Q9NRX4 125 aaPredicted RBP9.27□□□□□ -0.93
NIP7-202ENST00000254941 ZDHHC2Q9UIJ5 367 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 KNL1Q8NG31 2342 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 CACNA1IQ9P0X4 2223 aa9.27□□□□□ -0.93
NIP7-202ENST00000254941 DNAH14Q0VDD8 3507 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 MGAT4DA6NG13 374 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 ZNF195O14628 629 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 SLC16A5O15375 505 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 POP7O75817 140 aaKnown RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 SEMA4FO95754 770 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 HOXC4P09017 264 aaPredicted RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 VCLP18206 1134 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 MPSTP25325 297 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 EEF1DP29692 281 aaKnown RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 RPIAP49247 311 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 AGTR2P50052 363 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 ARFIP2P53365 341 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 AQP5P55064 265 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 ARHGAP8P85298 464 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 CDKL1Q00532 357 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 PLOD1Q02809 727 aaPredicted RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 PCBP2Q15366 365 aaKnown RBP eCLIP9.26□□□□□ -0.93
NIP7-202ENST00000254941 TMEM31Q5JXX7 168 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 ANKS6Q68DC2 871 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 XKR5Q6UX68 686 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 UBE2R2Q712K3 238 aaPredicted RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 LILRA3Q8N6C8 439 aaPredicted RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 TSTD1Q8NFU3 115 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 SKA2Q8WVK7 121 aaPredicted RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 FOXJ1Q92949 421 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 CLDN23Q96B33 292 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 TMEM120AQ9BXJ8 343 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 STN1Q9H668 368 aaKnown RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 COG4Q9H9E3 785 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 TBC1D17Q9HA65 648 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 PARVBQ9HBI1 364 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 FZD3Q9NPG1 666 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 FAM8A1Q9UBU6 413 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 PTBP2Q9UKA9 531 aaKnown RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 PDE10AQ9Y233 779 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 PCYT1BQ9Y5K3 369 aaPredicted RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 TNPO3Q9Y5L0 923 aaKnown RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 DNMT3AQ9Y6K1 912 aaPredicted RBP9.26□□□□□ -0.93
NIP7-202ENST00000254941 LRP4O75096 1905 aa9.26□□□□□ -0.93
NIP7-202ENST00000254941 ARHGEF17Q96PE2 2063 aaPredicted RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 KLHL33A6NCF5 533 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 LRRC14BA6NHZ5 514 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 SLCO1B7G3V0H7 640 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 H3BM21 787 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 MATN2O00339 956 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 E2F3O00716 465 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 UBFD1O14562 309 aaKnown RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 PSIP1O75475 530 aaKnown RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 GUCA1CO95843 209 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 HNRNPA2B1P22626 353 aaKnown RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 PDHA2P29803 388 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 PBLDP30039 288 aaPredicted RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 OXTRP30559 389 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 MAPK9P45984 424 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 PREPP48147 710 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CCR3P51677 355 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CDH13P55290 713 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CLCQ05315 142 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 IFT88Q13099 833 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 SULT1C3Q6IMI6 304 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 METTL2BQ6P1Q9 378 aaKnown RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 DOK6Q6PKX4 331 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CRTC3Q6UUV7 619 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 TRPM8Q7Z2W7 1104 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 MAVSQ7Z434 540 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 LRRTM4Q86VH4 590 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 AMZ2Q86W34 360 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CFAP206Q8IYR0 622 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 KIRREL3Q8IZU9 778 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 PJA1Q8NG27 643 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 HM13Q8TCT9 377 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 AGR3Q8TD06 166 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 RHBDF1Q96CC6 855 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 NSUN5Q96P11 429 aaKnown RBP9.25□□□□□ -0.93
NIP7-202ENST00000254941 HHIPQ96QV1 700 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 APOOQ9BUR5 198 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 TRIM54Q9BYV2 358 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 SHCBP1LQ9BZQ2 653 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 WWP1Q9H0M0 922 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 CHRDQ9H2X0 955 aa9.25□□□□□ -0.93
NIP7-202ENST00000254941 DPEP2Q9H4A9 486 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms