RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 GFM1Q96RP9 751 aaKnown RBP10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 NDNQ99608 321 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 NUDT22Q9BRQ3 303 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 FAM167BQ9BTA0 163 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 OR52A5Q9H2C5 316 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 SEMA6CQ9H3T2 930 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 VPS37BQ9H9H4 285 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 LRRC4CQ9HCJ2 640 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 SLC40A1Q9NP59 571 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 MOCS1Q9NZB8 636 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 TMEM9Q9P0T7 183 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 CIDEBQ9UHD4 219 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 GNPTGQ9UJJ9 305 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 WASF3Q9UPY6 502 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 RUVBL2Q9Y230 463 aaKnown RBP10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 CDYLQ9Y232 598 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 PSAT1Q9Y617 370 aa10.85□□□□□ -0.67
TUBBP1-201ENST00000248151 IGHV1OR21-1A0A087WYE8 117 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 A8MU76 341 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 NTN3O00634 580 aaPredicted RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 LIN7AO14910 233 aaPredicted RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 PFDN6O15212 129 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 EIF3HO15372 352 aaKnown RBP eCLIP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 GPC4O75487 556 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 MTHFD1P11586 935 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 SLC2A4P14672 509 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 PNLIPP16233 465 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 ECHS1P30084 290 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 LEPRP48357 1165 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 MGAT5Q09328 741 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 CBLBQ13191 982 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 SPIDRQ14159 915 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 KYNUQ16719 465 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 SYTL3Q4VX76 610 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 SNAP47Q5SQN1 464 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 RBM20Q5T481 1227 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 CDCP2Q5VXM1 449 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 TMEM26Q6ZUK4 368 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 ZNF438Q7Z4V0 828 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 SIDT2Q8NBJ9 832 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 ACVR1CQ8NER5 493 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 TFGQ92734 400 aaPredicted RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 TMEM159Q96B96 161 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 AHCYL2Q96HN2 611 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 INTS10Q9NVR2 710 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 OGFRQ9NZT2 677 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 NFU1Q9UMS0 254 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 CLCA2Q9UQC9 943 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 PCDHB1Q9Y5F3 818 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 KRT87PA6NCN2 255 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 E5RI56 91 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 QSOX1O00391 747 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 IFRD1O00458 451 aaPredicted RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 CSO75390 466 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 FAM155BO75949 473 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 ESR1P03372 595 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 APOA4P06727 396 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 FAM153BP0C7A2 387 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 AMD1P17707 334 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 SAT1P21673 171 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 ACADLP28330 430 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 GPR3P46089 330 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 CDKN2DP55273 166 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 TIAL1Q01085 375 aaKnown RBP eCLIP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 CUL1Q13616 776 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 FAM153CQ494X1 144 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 ACSBG2Q5FVE4 666 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 RNF187Q5TA31 235 aaPredicted RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 ZNF449Q6P9G9 518 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 OTOAQ7RTW8 1153 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 STRA8Q7Z7C7 330 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 PIM3Q86V86 326 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 TMPRSS12Q86WS5 348 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 LRRC6Q86X45 466 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 LMNTD2Q8IXW0 634 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 IFT20Q8IY31 132 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 GSPT2Q8IYD1 628 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 OR4E2Q8NGC2 313 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 OR5AR1Q8NGP9 310 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 UHMK1Q8TAS1 419 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 FBF1Q8TES7 1133 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 SKA2Q8WVK7 121 aaPredicted RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 SH3KBP1Q96B97 665 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 MRRFQ96E11 262 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 PANX3Q96QZ0 392 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 GPR21Q99679 349 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 AARSD1Q9BTE6 412 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 TSSK1BQ9BXA7 367 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 CCDC68Q9H2F9 335 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 STN1Q9H668 368 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 XKR8Q9H6D3 395 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 KLHL3Q9UH77 587 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 PLAGL1Q9UM63 463 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 TDRKHQ9Y2W6 561 aaKnown RBP10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 MED16Q9Y2X0 877 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 NFS1Q9Y697 457 aa10.84□□□□□ -0.67
TUBBP1-201ENST00000248151 TCRBV9S1A1TA0A576 114 aa10.83□□□□□ -0.68
TUBBP1-201ENST00000248151 PMS2P1A4D2B8 440 aa10.83□□□□□ -0.68
TUBBP1-201ENST00000248151 KLHL33A6NCF5 533 aa10.83□□□□□ -0.68
TUBBP1-201ENST00000248151 F8W8V4 182 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms