RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 BTN2A2Q8WVV5 523 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 FUBP1Q96AE4 644 aaKnown RBP12.98□□□□□ -0.33
SLIRP-201ENST00000238688 PTERQ96BW5 349 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 ERP27Q96DN0 273 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 LINGO1Q96FE5 620 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 SMIM14Q96QK8 99 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 MKRN2Q9H000 416 aaKnown RBP12.98□□□□□ -0.33
SLIRP-201ENST00000238688 MYLK2Q9H1R3 596 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 PRSS16Q9NQE7 514 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 ABCF3Q9NUQ8 709 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 DCTN4Q9UJW0 460 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 PILRBQ9UKJ0 227 aa12.98□□□□□ -0.33
SLIRP-201ENST00000238688 TRPM6Q9BX84 2022 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 BTN3A1O00481 513 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 KHNYNO15037 678 aaKnown RBP12.97□□□□□ -0.33
SLIRP-201ENST00000238688 MAP3K13O43283 966 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 ITM2AO43736 263 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 NUAK1O60285 661 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 SYNCRIPO60506 623 aaKnown RBP12.97□□□□□ -0.33
SLIRP-201ENST00000238688 SNX2O60749 519 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 SLC25A14O95258 325 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-201ENST00000238688 EPHX1P07099 455 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 C8GP07360 202 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 FGF4P08620 206 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 MTHFD2P13995 350 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 GFAPP14136 432 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 PCSK2P16519 638 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 ACTN3Q08043 901 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-201ENST00000238688 CES4AQ5XG92 561 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 ANKS6Q68DC2 871 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 ZNF776Q68DI1 518 aaPredicted RBP12.97□□□□□ -0.33
SLIRP-201ENST00000238688 EPGNQ6UW88 154 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 NAPRTQ6XQN6 538 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 ACAD11Q709F0 780 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 HSD11B1LQ7Z5J1 315 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 SYT12Q8IV01 421 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 PDPRQ8NCN5 879 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 RFWD2Q8NHY2 731 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 UBTD2Q8WUN7 234 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 ASZ1Q8WWH4 475 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 GLYATL1Q969I3 302 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 FAM131CQ96AQ9 280 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 AP2M1Q96CW1 435 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 SPACA7Q96KW9 195 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 TMEM237Q96Q45 408 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 C20orf27Q9GZN8 174 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 HEY2Q9UBP5 337 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 LNPEPQ9UIQ6 1025 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 CYP8B1Q9UNU6 501 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 ANKRD12Q6UB98 2062 aa12.97□□□□□ -0.33
SLIRP-201ENST00000238688 VEGFDO43915 354 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 VPS4BO75351 444 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 UBOX5O94941 541 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 KCNK5O95279 499 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 RPS17P08708 135 aaKnown RBP12.96□□□□□ -0.33
SLIRP-201ENST00000238688 F7P08709 466 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-201ENST00000238688 PRSS56P0CW18 603 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 VCLP18206 1134 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 MSH3P20585 1137 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 CALB2P22676 271 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 AOAHP28039 575 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 PRDX6P30041 224 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 AKT1P31749 480 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 SCTRP47872 440 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 LIG3P49916 1009 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 COPAP53621 1224 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 INHBCP55103 352 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 AP1S2P56377 157 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 LCP2Q13094 533 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 LYSMD4Q5XG99 296 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 NEK5Q6P3R8 708 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 SLC23A3Q6PIS1 610 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 Q6ZVL8 140 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 FRA10AC1Q70Z53 315 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 CCNYL1Q8N7R7 359 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 SIDT2Q8NBJ9 832 aaKnown RBP12.96□□□□□ -0.33
SLIRP-201ENST00000238688 OR2T3Q8NH03 318 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 GIMAP7Q8NHV1 300 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 CXorf40AQ8TE69 158 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 ARRDC3Q96B67 414 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 NUS1Q96E22 293 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 MAGEB10Q96LZ2 347 aaPredicted RBP12.96□□□□□ -0.33
SLIRP-201ENST00000238688 CNTNAP3BQ96NU0 1288 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 C1QTNF7Q9BXJ2 289 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 NUSAP1Q9BXS6 441 aaKnown RBP12.96□□□□□ -0.33
SLIRP-201ENST00000238688 TRIM54Q9BYV2 358 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 CNTNAP3Q9BZ76 1288 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 FNDC3AQ9Y2H6 1198 aaKnown RBP12.96□□□□□ -0.33
SLIRP-201ENST00000238688 OARD1Q9Y530 152 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 DOCK9Q9BZ29 2069 aa12.96□□□□□ -0.33
SLIRP-201ENST00000238688 KMT2BQ9UMN6 2715 aaPredicted RBP12.96□□□□□ -0.34
SLIRP-201ENST00000238688 BPTFQ12830 3046 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 PABPN1LA6NDY0 278 aaKnown RBP12.95□□□□□ -0.34
SLIRP-201ENST00000238688 SUPT3HB4E1H0 165 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 NEMP1O14524 444 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ZNF195O14628 629 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 GIPC1O14908 333 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 ZNF217O75362 1048 aa12.95□□□□□ -0.34
SLIRP-201ENST00000238688 SUPT3HO75486 399 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms