RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 NHSL2Q5HYW2 709 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 USP45Q70EL2 814 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 PROSER1Q86XN7 944 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 PAF1Q8N7H5 531 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 ARMC5Q96C12 935 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 PAWRQ96IZ0 340 aaKnown RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 ZNF641Q96N77 438 aaPredicted RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 CIB1Q99828 191 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 KCTD14Q9BQ13 255 aaPredicted RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 C11orf49Q9H6J7 331 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 DUS2Q9NX74 493 aaKnown RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 KCTD5Q9NXV2 234 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 OPTCQ9UBM4 332 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 TRPS1Q9UHF7 1281 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 SLC4A7Q9Y6M7 1214 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 A0A1W2PRU2 124 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 SLC28A1O00337 649 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 CLPTM1O96005 669 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 C8AP07357 584 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 EBLN1P0CF75 366 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 CKMT2P17540 419 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 CTSOP43234 321 aaPredicted RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 MAD2L1Q13257 205 aaPredicted RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 APOFQ13790 326 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 NR6A1Q15406 480 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 RFTN2Q52LD8 501 aaPredicted RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 LRRC66Q68CR7 880 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 C22orf39Q6P5X5 142 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 SLC30A9Q6PML9 568 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 CMTM8Q8IZV2 173 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 ELMOD1Q8N336 334 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 CENPNQ96H22 339 aaPredicted RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 RPL10LQ96L21 214 aaKnown RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 YME1L1Q96TA2 773 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 EGFL8Q99944 293 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 INTS7Q9NVH2 962 aaKnown RBP15.88■□□□□ 0.13
UBE3D-201ENST00000237186 ASIC5Q9NY37 505 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 RNF11Q9Y3C5 154 aa15.88■□□□□ 0.13
UBE3D-201ENST00000237186 GRM6O15303 877 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 RGS14O43566 566 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 KATNA1O75449 491 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 POP4O95707 220 aaKnown RBP15.87■□□□□ 0.13
UBE3D-201ENST00000237186 C7P10643 843 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 GGT5P36269 586 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 PIK3CGP48736 1102 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 STK19P49842 368 aaPredicted RBP15.87■□□□□ 0.13
UBE3D-201ENST00000237186 CCT8P50990 548 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 GBX1Q14549 363 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 ADRM1Q16186 407 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 CARD16Q5EG05 197 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 PLPP6Q8IY26 295 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 ADGRG2Q8IZP9 1017 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 KREMEN2Q8NCW0 462 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 TTC16Q8NEE8 873 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 NAT14Q8WUY8 206 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 ULK4Q96C45 1275 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 COPS8Q99627 209 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 ANKRD60Q9BZ19 345 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 WWOXQ9NZC7 414 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 AURKCQ9UQB9 309 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 ANGPTL3Q9Y5C1 460 aa15.87■□□□□ 0.13
UBE3D-201ENST00000237186 ENO4A6NNW6 628 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 TIMP1P01033 207 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 LINC00271P0C7V0 271 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 LHCGRP22888 699 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ARL1P40616 181 aaPredicted RBP15.86■□□□□ 0.13
UBE3D-201ENST00000237186 GDF5P43026 501 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 PWP1Q13610 501 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 FUT11Q495W5 492 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 IYDQ6PHW0 289 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 TBC1D21Q8IYX1 336 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 GLB1L3Q8NCI6 653 aaPredicted RBP15.86■□□□□ 0.13
UBE3D-201ENST00000237186 FAM110BQ8TC76 370 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 TFAP2CQ92754 450 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 USP7Q93009 1102 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 DGCR14Q96DF8 476 aaKnown RBP15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ASIC4Q96FT7 647 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 SLC29A3Q9BZD2 475 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ZMYM5Q9UJ78 669 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 EIF3LQ9Y262 564 aaKnown RBP15.86■□□□□ 0.13
UBE3D-201ENST00000237186 PCDHB3Q9Y5E6 796 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 AK5Q9Y6K8 562 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 LTBP2Q14767 1821 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 WASH3PC4AMC7 463 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 SOCS2O14508 198 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ULK1O75385 1050 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 STK16O75716 305 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 CXCL14O95715 111 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ADH1AP07327 375 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 CSF2RAP15509 400 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 EPB42P16452 691 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 GJA1P17302 382 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ITGB8P26012 769 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 VARSP26640 1264 aaKnown RBP15.86■□□□□ 0.13
UBE3D-201ENST00000237186 OXTRP30559 389 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 GSTT1P30711 240 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 B4GALNT1Q00973 533 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 CYP51A1Q16850 503 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 ATP13A5Q4VNC0 1218 aa15.86■□□□□ 0.13
UBE3D-201ENST00000237186 SLC2A7Q6PXP3 512 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms