RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 CLIP3Q96DZ5 547 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 MRPS30Q9NP92 439 aaKnown RBP7.12□□□□□ -1.27
CPS1-201ENST00000233072 PADI3Q9ULW8 664 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 ZNF879B4DU55 563 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 ZBTB22O15209 634 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 LRCH4O75427 683 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 SAGP10523 405 aaPredicted RBP7.12□□□□□ -1.27
CPS1-201ENST00000233072 CRISP3P54108 245 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 EIF5AP63241 154 aaKnown RBP7.12□□□□□ -1.27
CPS1-201ENST00000233072 BNIP1Q12981 228 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 KCNC3Q14003 757 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 DLG2Q15700 870 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 DDI2Q5TDH0 399 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 SDHAF4Q5VUM1 108 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 VANGL1Q8TAA9 524 aaPredicted RBP7.12□□□□□ -1.27
CPS1-201ENST00000233072 SNIP1Q8TAD8 396 aaKnown RBP7.12□□□□□ -1.27
CPS1-201ENST00000233072 SUN5Q8TC36 379 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 SNX33Q8WV41 574 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 NSMCE3Q96MG7 304 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 SCGB3A2Q96PL1 93 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 GPER1Q99527 375 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 MCUBQ9NWR8 336 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 ELOVL2Q9NXB9 296 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 DNAJB9Q9UBS3 223 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 ZNF221Q9UK13 617 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 IGKV6D-41A0A0C4DH26 115 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 CXCR6O00574 342 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 RASGRP1O95267 797 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 NADKO95544 446 aaPredicted RBP7.12□□□□□ -1.27
CPS1-201ENST00000233072 UGT2B4P06133 528 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 RAP2AP10114 183 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 CDH1P12830 882 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 GRK6P43250 576 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 CCR8P51685 355 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 ZNF280AP59817 542 aaPredicted RBP7.12□□□□□ -1.27
CPS1-201ENST00000233072 ARPC4P59998 168 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 DSC2Q02487 901 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 ZNF33AQ06730 810 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 RASGEF1BQ0VAM2 473 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 DPYSL2Q16555 572 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 ADGRD2Q7Z7M1 963 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 LRRC57Q8N9N7 239 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 FAM13CQ8NE31 585 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 LCN9Q8WX39 176 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 OSBPL2Q9H1P3 480 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 IFT46Q9NQC8 304 aa7.12□□□□□ -1.27
CPS1-201ENST00000233072 POLR3BQ9NW08 1133 aaPredicted RBP7.12□□□□□ -1.27
CPS1-201ENST00000233072 AKAP12Q02952 1782 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 SHOX2O60902 331 aaPredicted RBP7.11□□□□□ -1.27
CPS1-201ENST00000233072 RNASEH2AO75792 299 aaKnown RBP7.11□□□□□ -1.27
CPS1-201ENST00000233072 APOC1P02654 83 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 PFKMP08237 780 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 GNAZP19086 355 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 ALDH3A2P51648 485 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 AKR1D1P51857 326 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 NRG3P56975 720 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 UBXN11Q5T124 520 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 IL23RQ5VWK5 629 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 SPRYD7Q5W111 196 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 OLFML2AQ68BL7 652 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 CLNKQ7Z7G1 428 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 SPPL2CQ8IUH8 684 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 DAW1Q8N136 415 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 PNPLA2Q96AD5 504 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 CYP2S1Q96SQ9 504 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 SRMSQ9H3Y6 488 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 PLEKHA1Q9HB21 404 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 MKKSQ9NPJ1 570 aaPredicted RBP7.11□□□□□ -1.27
CPS1-201ENST00000233072 RPL36Q9Y3U8 105 aaKnown RBP7.11□□□□□ -1.27
CPS1-201ENST00000233072 OR2AG2A6NM03 316 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 CDK14O94921 469 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 PRAMEF12O95522 483 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 RPLP0P05388 317 aaKnown RBP7.11□□□□□ -1.27
CPS1-201ENST00000233072 EPHX1P07099 455 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 GNSP15586 552 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 PTGIRP43119 386 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 FLT3LGP49771 235 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 SCN1BQ07699 218 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 RBBP4Q09028 425 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 IL18R1Q13478 541 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 POM121L1PQ3SYA9 428 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 SLC9B1Q4ZJI4 515 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 HGSNATQ68CP4 663 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 TUBA3EQ6PEY2 450 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 ATG14Q6ZNE5 492 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 RASSF6Q6ZTQ3 369 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 CMC1Q7Z7K0 106 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 C1orf127Q8N9H9 656 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 GRPEL2Q8TAA5 225 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 SLCO2A1Q92959 643 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 EXOC2Q96KP1 924 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 TUBGCP5Q96RT8 1024 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 ZSCAN5AQ9BUG6 496 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 USP29Q9HBJ7 922 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 ITM2CQ9NQX7 267 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 ILVBLA1L0T0 632 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 BTBD19C9JJ37 291 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 USP2O75604 605 aaPredicted RBP7.11□□□□□ -1.27
CPS1-201ENST00000233072 ZNF30P17039 623 aa7.11□□□□□ -1.27
CPS1-201ENST00000233072 IDH3AP50213 366 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms