RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 CDC7O00311 574 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 TSPAN4O14817 238 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 ALDH3A2P51648 485 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 CD83Q01151 205 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 STK11Q15831 433 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 FAM98BQ52LJ0 330 aaKnown RBP13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 PAQR3Q6TCH7 311 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 RANBP10Q6VN20 620 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 HORMAD1Q86X24 394 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 ARHGAP12Q8IWW6 846 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 OR10A6Q8NH74 314 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 MCOLN3Q8TDD5 553 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 FKBP10Q96AY3 582 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 CEP19Q96LK0 163 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 MYOCQ99972 504 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 TLR9Q9NR96 1032 aa13.95□□□□□ -0.18
PCDHB3-201ENST00000231130 TCRBV5S2A0A599 114 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 MATN3O15232 486 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 OR4F21O95013 312 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 S1PR4O95977 384 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 UQCRC1P31930 480 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 ST13P50502 369 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 GP2P55259 537 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 TRIP4Q15650 581 aaPredicted RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 HID1Q8IV36 788 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 METTL4Q8N3J2 472 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 SNAPC3Q92966 411 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 CNDP2Q96KP4 475 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 EGLN2Q96KS0 407 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 TRMOQ9BU70 441 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 FAM118AQ9NWS6 357 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 ERVH48-1M5A8F1 160 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 BTN3A1O00481 513 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 ARHGEF9O43307 516 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 MITFO75030 526 aaPredicted RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 EPN2O95208 641 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 HMBSP08397 361 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 SLC2A3P11169 496 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 CD1DP15813 335 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 CCNCP24863 283 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 EIF2DP41214 584 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 OR3A3P47888 321 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 SLC9A3P48764 834 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 PGFP49763 221 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 CLCNKBP51801 687 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 SNRPD2P62316 118 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 MADCAM1Q13477 382 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 GTF2H3Q13889 308 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 SULT1C3Q6IMI6 304 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 TUBA3EQ6PEY2 450 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 RASSF5Q8WWW0 418 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 LPPQ93052 612 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 FAM162AQ96A26 154 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 VMP1Q96GC9 406 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 SLC9A7Q96T83 725 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 MKRN2Q9H000 416 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 PAK1IP1Q9NWT1 392 aaPredicted RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 KCNN3Q9UGI6 736 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 ZMYM5Q9UJ78 669 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 LEF1Q9UJU2 399 aaPredicted RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 A0A0U1RQS6 177 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 MYO1GB0I1T2 1018 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 GLP2RO95838 553 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 GOT2P00505 430 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 CHRNA1P02708 482 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 HTR1AP08908 422 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 JUNBP17275 347 aaPredicted RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 DPY19L1Q2PZI1 675 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 MARCH8Q5T0T0 291 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 SDHAF4Q5VUM1 108 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 ANKS6Q68DC2 871 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 EFL1Q7Z2Z2 1120 aaKnown RBP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 GRPEL2Q8TAA5 225 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 LGALS12Q96DT0 336 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 SMIM14Q96QK8 99 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 PAAF1Q9BRP4 392 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 TRIM54Q9BYV2 358 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 CLPBQ9H078 707 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 ABCG8Q9H221 673 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 RIBC2Q9H4K1 309 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 RASSF1Q9NS23 344 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 ADGRE2Q9UHX3 823 aa13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.94□□□□□ -0.18
PCDHB3-201ENST00000231130 NPEPPSL1A6NEC2 478 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 TRIM64BA6NI03 449 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 USP2O75604 605 aaPredicted RBP13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 F9P00740 461 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 ALPLP05186 524 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 WEE1P30291 646 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 POLD2P49005 469 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 ZNF280AP59817 542 aaPredicted RBP13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 NPTX1Q15818 432 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 TTC23Q5W5X9 447 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 GDPD3Q7L5L3 318 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 UBE2J2Q8N2K1 259 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 CHDHQ8NE62 594 aaPredicted RBP13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 CLHC1Q8NHS4 586 aa13.93□□□□□ -0.18
PCDHB3-201ENST00000231130 CLSTN3Q9BQT9 956 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms