RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 BOP1Q14137 746 aaKnown RBP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 GBX1Q14549 363 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 FASTKD3Q14CZ7 662 aaKnown RBP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 FASTKD1Q53R41 847 aaKnown RBP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 DUPD1Q68J44 220 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 NEPROQ6NW34 567 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 SYDE1Q6ZW31 735 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 RAB11FIP2Q7L804 512 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 CLEC14AQ86T13 490 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 CILP2Q8IUL8 1156 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 ZNF669Q96BR6 464 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 C16orf45Q96MC5 204 aaPredicted RBP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 C12orf66Q96MD2 445 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 SLC30A3Q99726 388 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 EBNA1BP2Q99848 306 aaKnown RBP13.39□□□□□ -0.27
VEGFA-201ENST00000230480 MENTQ9BUN1 341 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 CARD6Q9BX69 1037 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 EPB41L5Q9HCM4 733 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 SLC17A6Q9P2U8 582 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 ASIC3Q9UHC3 531 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 SLC24A2Q9UI40 661 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 TEX264Q9Y6I9 313 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 RPS6KL1Q9Y6S9 549 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 PCM1Q15154 2024 aa13.39□□□□□ -0.27
VEGFA-201ENST00000230480 NBEAQ8NFP9 2946 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 MAGEB16A2A368 324 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 KLHL33A6NCF5 533 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 CFAP99D6REC4 459 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 E7ESA3 106 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 PRMT5O14744 637 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-201ENST00000230480 USP1O94782 785 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 C1QAP02745 245 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 RALBP11234 206 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 SLC2A4P14672 509 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 VCLP18206 1134 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 CTBP1Q13363 440 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 DHX34Q14147 1143 aaKnown RBP13.38□□□□□ -0.27
VEGFA-201ENST00000230480 MORF4L2Q15014 288 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 BRD3Q15059 726 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 HP1BP3Q5SSJ5 553 aaPredicted RBP13.38□□□□□ -0.27
VEGFA-201ENST00000230480 LYPLAL1Q5VWZ2 237 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 TRMT10BQ6PF06 316 aaKnown RBP13.38□□□□□ -0.27
VEGFA-201ENST00000230480 ZDHHC24Q6UX98 284 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 RASGRP3Q8IV61 690 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 LMNTD1Q8N9Z9 388 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 GIMAP7Q8NHV1 300 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 SNIP1Q8TAD8 396 aaKnown RBP13.38□□□□□ -0.27
VEGFA-201ENST00000230480 FLVCR1-AS1Q8TAF5 88 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 NCSTNQ92542 709 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 SH3KBP1Q96B97 665 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 NXPE2Q96DL1 559 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 TMEM74Q96NL1 305 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 TRIM31Q9BZY9 425 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 RAB33BQ9H082 229 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 KIR3DX1Q9H7L2 352 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 IMP3Q9NV31 184 aaKnown RBP13.38□□□□□ -0.27
VEGFA-201ENST00000230480 SIDT1Q9NXL6 827 aaKnown RBP13.38□□□□□ -0.27
VEGFA-201ENST00000230480 FOXJ2Q9P0K8 574 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 EPHA6Q9UF33 1036 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 CDC23Q9UJX2 597 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 LOXL2Q9Y4K0 774 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 AK5Q9Y6K8 562 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 IGSF10Q6WRI0 2623 aa13.38□□□□□ -0.27
VEGFA-201ENST00000230480 FER1L5A0AVI2 2057 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 BTN3A3O00478 584 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 PLD2O14939 933 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 NIPSNAP2O75323 286 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 UBXN7O94888 489 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 SLCO2B1O94956 709 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 TNFSF15O95150 251 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 ITPKBP27987 946 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 EIF2S3P41091 472 aaKnown RBP13.37□□□□□ -0.27
VEGFA-201ENST00000230480 ELK3P41970 407 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 PAFAH1B1P43034 410 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 CD151P48509 253 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 ADARP55265 1226 aaKnown RBP13.37□□□□□ -0.27
VEGFA-201ENST00000230480 SARNPP82979 210 aaKnown RBP13.37□□□□□ -0.27
VEGFA-201ENST00000230480 CBX1P83916 185 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 RPA4Q13156 261 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 MAP9Q49MG5 647 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 STEAP4Q687X5 459 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 UNC5AQ6ZN44 842 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 PDZD3Q86UT5 571 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 SLC22A15Q8IZD6 547 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 FBXO39Q8N4B4 442 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 OR5AR1Q8NGP9 310 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 OR10G6Q8NH81 332 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 ELMO1Q92556 727 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 CXorf40BQ96DE9 158 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 STAMBPL1Q96FJ0 436 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 CRELD1Q96HD1 420 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 C9orf72Q96LT7 481 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 ERP44Q9BS26 406 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-201ENST00000230480 LATS2Q9NRM7 1088 aa13.37□□□□□ -0.27
VEGFA-201ENST00000230480 A0A087WV48 116 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 KRT87PA6NCN2 255 aa13.36□□□□□ -0.27
VEGFA-201ENST00000230480 A8MU76 341 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms