RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 RPS27LQ71UM5 84 aaKnown RBP20.25■□□□□ 0.83
SNX3-201ENST00000230085 RTL3Q8N8U3 475 aaKnown RBP20.25■□□□□ 0.83
SNX3-201ENST00000230085 PJA1Q8NG27 643 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 OR52E4Q8NGH9 312 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 SNX19Q92543 992 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 POP5Q969H6 163 aaKnown RBP20.25■□□□□ 0.83
SNX3-201ENST00000230085 NAA50Q9GZZ1 169 aaKnown RBP20.25■□□□□ 0.83
SNX3-201ENST00000230085 HPS4Q9NQG7 708 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 USE1Q9NZ43 259 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 MYO16Q9Y6X6 1858 aa20.25■□□□□ 0.83
SNX3-201ENST00000230085 IFRD1O00458 451 aaPredicted RBP20.24■□□□□ 0.83
SNX3-201ENST00000230085 KPNA4O00629 521 aaPredicted RBP20.24■□□□□ 0.83
SNX3-201ENST00000230085 ZNF197O14709 1029 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 PMPCBO75439 489 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 KATNA1O75449 491 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 OGNP20774 298 aaKnown RBP20.24■□□□□ 0.83
SNX3-201ENST00000230085 CRHBPP24387 322 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 POLR2IP36954 125 aaKnown RBP20.24■□□□□ 0.83
SNX3-201ENST00000230085 KCNQ1P51787 676 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 KCNK10P57789 538 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 CYP4F8P98187 520 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 TOP3AQ13472 1001 aaPredicted RBP20.24■□□□□ 0.83
SNX3-201ENST00000230085 SEPT6Q14141 434 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 OXA1LQ15070 435 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 TTC23Q5W5X9 447 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 GET4Q7L5D6 327 aaPredicted RBP20.24■□□□□ 0.83
SNX3-201ENST00000230085 RNF135Q8IUD6 432 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 CHCHD4Q8N4Q1 142 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 SLC15A4Q8N697 577 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 PTGR2Q8N8N7 351 aaPredicted RBP20.24■□□□□ 0.83
SNX3-201ENST00000230085 FKBP10Q96AY3 582 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 VMP1Q96GC9 406 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 CCDC115Q96NT0 180 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 NECTIN4Q96NY8 510 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 FEM1AQ9BSK4 669 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 NTN4Q9HB63 628 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 MID1IP1Q9NPA3 183 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 DENND4CQ5VZ89 1909 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 ANAPC1Q9H1A4 1944 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 DOCK4Q8N1I0 1966 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 OBSL1O75147 1896 aa20.24■□□□□ 0.83
SNX3-201ENST00000230085 STX16O14662 325 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 KLK8O60259 260 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 SEC24DO94855 1032 aaPredicted RBP20.23■□□□□ 0.83
SNX3-201ENST00000230085 CYBBP04839 570 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 RPS17P08708 135 aaKnown RBP20.23■□□□□ 0.83
SNX3-201ENST00000230085 HGFP14210 728 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 ZNF182P17025 639 aaPredicted RBP20.23■□□□□ 0.83
SNX3-201ENST00000230085 ZNF37AP17032 561 aaPredicted RBP20.23■□□□□ 0.83
SNX3-201ENST00000230085 CEBPBP17676 345 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 TIAL1Q01085 375 aaKnown RBP eCLIP20.23■□□□□ 0.832e-6■■■■□ 22.1
SNX3-201ENST00000230085 NFYCQ13952 458 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 NR1D2Q14995 579 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 TEAD2Q15562 447 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 THAP5Q7Z6K1 395 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 GALNT13Q8IUC8 556 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 KIAA2013Q8IYS2 634 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 OFCC1Q8IZS5 231 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 BIRC7Q96CA5 298 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 ZNF599Q96NL3 588 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 SMOC2Q9H3U7 446 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 RAD21L1Q9H4I0 556 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 SELENONQ9NZV5 590 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 PCDHGB1Q9Y5G3 927 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 FAM234BA2RU67 622 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 ZNF840PA6NDX5 716 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 ARNTLO00327 626 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 KERAO60938 352 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 IL9P15248 144 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 HRH2P25021 359 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 RENBPP51606 427 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 CAPRIN1Q14444 709 aaKnown RBP20.23■□□□□ 0.83
SNX3-201ENST00000230085 ZNF846Q147U1 533 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 RPS6KA2Q15349 733 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 SMAD2Q15796 467 aaKnown RBP20.23■□□□□ 0.83
SNX3-201ENST00000230085 ZC3H7AQ8IWR0 971 aaKnown RBP20.23■□□□□ 0.83
SNX3-201ENST00000230085 UMODL1-AS1Q8N2C9 162 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 TEX26Q8N6G2 289 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 PIK3C3Q8NEB9 887 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 MAGEE2Q8TD90 523 aaPredicted RBP20.23■□□□□ 0.83
SNX3-201ENST00000230085 FGF13Q92913 245 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 KIAA1191Q96A73 305 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 C1orf74Q96LT6 269 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 CHID1Q9BWS9 393 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 NMUR1Q9HB89 426 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 TRPM5Q9NZQ8 1165 aa20.23■□□□□ 0.83
SNX3-201ENST00000230085 DOCK8Q8NF50 2099 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 A0A1W2PQH9 124 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 ADAM23O75077 832 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 FGF19O95750 216 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 TFPTP0C1Z6 253 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 ITIH1P19827 911 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 TRAF2Q12933 501 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 TXNDC8Q6A555 127 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 SCD5Q86SK9 330 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 MON1AQ86VX9 555 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 HID1Q8IV36 788 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 CPNE9Q8IYJ1 553 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 TUBGCP3Q96CW5 907 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 WDR12Q9GZL7 423 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms