RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 TMEM246Q9BRR3 403 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 MROQ9BYG7 248 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 ATP13A3Q9H7F0 1226 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 TMEM248Q9NWD8 314 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 ANKMY1Q9P2S6 941 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 RNF112Q9ULX5 631 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 TLR6Q9Y2C9 796 aa9.27□□□□□ -0.93
HLA-DOA-201ENST00000229829 A0A0D9SEW6 157 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 A0A1W2PP18 115 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 CRCPO75575 148 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RHOBTB1O94844 696 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 SEMA3DO95025 777 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 GSNP06396 782 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 IFITM2Q01629 132 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 LCP2Q13094 533 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 SPRED1Q7Z699 444 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 FAM20CQ8IXL6 584 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TADA1Q96BN2 335 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 CDKN2AIPNLQ96HQ2 116 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RNF145Q96MT1 663 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RPRD1AQ96P16 312 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 KCTD14Q9BQ13 255 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 AARSD1Q9BTE6 412 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 C9orf16Q9BUW7 83 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TRIM62Q9BVG3 475 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 KATNAL1Q9BW62 490 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 FUNDC2Q9BWH2 189 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 CATSPERZQ9NTU4 200 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TEKT2Q9UIF3 430 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TSR3Q9UJK0 312 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 NPEPPSL1A6NEC2 478 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TSC22D2O75157 780 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 BCAS1O75363 584 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RASAL1O95294 804 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 C1RP00736 705 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 CYBBP04839 570 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 HRH2P25021 359 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 DCKP27707 260 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RFC2P35250 354 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 STC1P52823 247 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR4D2P58180 307 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 BNIP2Q12982 314 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 MRNIPQ6NTE8 343 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 PLEKHG7Q6ZR37 379 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 MRPL10Q7Z7H8 261 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ZNF280BQ86YH2 543 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ARMC8Q8IUR7 673 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TERB1Q8NA31 727 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ZNF420Q8TAQ5 688 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RAB2BQ8WUD1 216 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 SEPT8Q92599 483 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 PMEPA1Q969W9 287 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 PARK7Q99497 189 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 GPR21Q99679 349 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ADAM2Q99965 735 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ANGPTL3Q9Y5C1 460 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 GNGT2O14610 69 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR1I1O60431 355 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RAMP2O60895 175 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RPP40O75818 363 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 UGT2B4P06133 528 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 OR1E1P30953 314 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 THPOP40225 353 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 SUOXP51687 545 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 KCNK10P57789 538 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ACVR1Q04771 509 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TUSC3Q13454 348 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 IRAK1BP1Q5VVH5 260 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ZCCHC8Q6NZY4 707 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 BPHLQ86WA6 291 aaPredicted RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 PACRGLQ8N7B6 248 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ATAD1Q8NBU5 361 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 ATL1Q8WXF7 558 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 BIRC7Q96CA5 298 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TRIM15Q9C019 465 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 WDR12Q9GZL7 423 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TFB2MQ9H5Q4 396 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 C12orf4Q9NQ89 552 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 RPRD1BQ9NQG5 326 aaKnown RBP9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 SLC30A1Q9Y6M5 507 aa9.26□□□□□ -0.93
HLA-DOA-201ENST00000229829 TRIM64A6NGJ6 449 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 GPR39O43194 453 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 JRKO75564 520 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 ITGB6P18564 788 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 RPS9P46781 194 aaKnown RBP9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 RGRP47804 291 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 CLK1P49759 484 aaKnown RBP9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 PLA2G16P53816 162 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 NRG1Q02297 640 aaPredicted RBP9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 RCAN2Q14206 197 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 SELPLGQ14242 412 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 ANKS6Q68DC2 871 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 PRMT9Q6P2P2 845 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 CYP20A1Q6UW02 462 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 CYP2U1Q7Z449 544 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 MON1AQ86VX9 555 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 ASCC1Q8N9N2 400 aaKnown RBP9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 RHEBL1Q8TAI7 183 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 ADAMTS16Q8TE57 1224 aa9.25□□□□□ -0.93
HLA-DOA-201ENST00000229829 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms