RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 C9P02748 559 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 LIFP15018 202 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 BRAFP15056 766 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 VCLP18206 1134 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 ITGALP20701 1170 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 IDSP22304 550 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 SLC19A1P41440 591 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 CYP4F2P78329 520 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 PRAMEP78395 509 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 SLC7A5Q01650 507 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 TMEM115Q12893 351 aaPredicted RBP17.64■□□□□ 0.41
PFN1-201ENST00000225655 GTF2H3Q13889 308 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 SEPT7Q16181 437 aaKnown RBP17.64■□□□□ 0.41
PFN1-201ENST00000225655 TBR1Q16650 682 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 TSTD2Q5T7W7 516 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 FAM151BQ6UXP7 276 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 CENPUQ71F23 418 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 CAND1Q86VP6 1230 aaKnown RBP17.64■□□□□ 0.41
PFN1-201ENST00000225655 TRAPPC5Q8IUR0 188 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 RBM12BQ8IXT5 1001 aaKnown RBP17.64■□□□□ 0.41
PFN1-201ENST00000225655 CACNA2D3Q8IZS8 1091 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 GDAP1Q8TB36 358 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.64■□□□□ 0.41
PFN1-201ENST00000225655 LRRC39Q96DD0 335 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 STAMBPL1Q96FJ0 436 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 DNAJC1Q96KC8 554 aaKnown RBP17.64■□□□□ 0.41
PFN1-201ENST00000225655 SLC40A1Q9NP59 571 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 SYBUQ9NX95 663 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 OGFRQ9NZT2 677 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 KLHL3Q9UH77 587 aa17.64■□□□□ 0.41
PFN1-201ENST00000225655 ZNF106Q9H2Y7 1883 aaKnown RBP17.63■□□□□ 0.41
PFN1-201ENST00000225655 TOX3O15405 576 aaPredicted RBP17.63■□□□□ 0.41
PFN1-201ENST00000225655 RAD1O60671 282 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 KCNJ13O60928 360 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 AVILO75366 819 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 SLU7O95391 586 aaKnown RBP17.63■□□□□ 0.41
PFN1-201ENST00000225655 PRAMEF1O95521 474 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 SFTPCP11686 197 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 RPL10P27635 214 aaKnown RBP17.63■□□□□ 0.41
PFN1-201ENST00000225655 TMPRSS15P98073 1019 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 BBS9Q3SYG4 887 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 IFT20Q8IY31 132 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 NLGN4XQ8N0W4 816 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 NLGN4YQ8NFZ3 816 aaPredicted RBP17.63■□□□□ 0.41
PFN1-201ENST00000225655 OR13C4Q8NGS5 318 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 GABPB2Q8TAK5 448 aaPredicted RBP17.63■□□□□ 0.41
PFN1-201ENST00000225655 ULK4Q96C45 1275 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 C9orf72Q96LT7 481 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 TTC25Q96NG3 672 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 TTC1Q99614 292 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 CTRCQ99895 268 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 KIFC1Q9BW19 673 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 ZCCHC2Q9C0B9 1178 aaKnown RBP17.63■□□□□ 0.41
PFN1-201ENST00000225655 TSPYL1Q9H0U9 437 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 CHRAC1Q9NRG0 131 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 MTRF1LQ9UGC7 380 aaKnown RBP17.63■□□□□ 0.41
PFN1-201ENST00000225655 FKBPLQ9UIM3 349 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 SOX13Q9UN79 622 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 KCTD3Q9Y597 815 aa17.63■□□□□ 0.41
PFN1-201ENST00000225655 POLR1CO15160 346 aaPredicted RBP17.62■□□□□ 0.41
PFN1-201ENST00000225655 SRP72O76094 671 aaKnown RBP17.62■□□□□ 0.41
PFN1-201ENST00000225655 POLBP06746 335 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 FAM87AP0C7U9 286 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 TYRP1P17643 537 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 AMD1P17707 334 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 MAP4P27816 1152 aaKnown RBP17.62■□□□□ 0.41
PFN1-201ENST00000225655 MAGEA3P43357 314 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 PLTPP55058 493 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 GFERP55789 205 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 CRADDP78560 199 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 CUL1Q13616 776 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 CHRNA6Q15825 494 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 LDLRAP1Q5SW96 308 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 TEX35Q5T0J7 233 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 AFTPHQ6ULP2 937 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 DDHD1Q8NEL9 900 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 STARD5Q9NSY2 213 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 SIDT1Q9NXL6 827 aaKnown RBP17.62■□□□□ 0.41
PFN1-201ENST00000225655 CRLS1Q9UJA2 301 aa17.62■□□□□ 0.41
PFN1-201ENST00000225655 TMEM184BQ9Y519 407 aaPredicted RBP17.62■□□□□ 0.41
PFN1-201ENST00000225655 FAM237BA0A1B0GVD1 139 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 CCDC78A2IDD5 438 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 OR52A4PA6NMU1 304 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 H7C0S8 307 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 GAPDHSO14556 408 aaPredicted RBP17.61■□□□□ 0.41
PFN1-201ENST00000225655 EIF3HO15372 352 aaKnown RBP eCLIP17.61■□□□□ 0.41
PFN1-201ENST00000225655 CAPN5O15484 640 aaPredicted RBP17.61■□□□□ 0.41
PFN1-201ENST00000225655 UGT1A9O60656 530 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 TTC4O95801 387 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 PGAM1P18669 254 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 UGT1A6P19224 532 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 UGT1A1P22309 533 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 UGT1A4P22310 534 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 MC4RP32245 332 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 PPARGP37231 505 aaPredicted RBP17.61■□□□□ 0.41
PFN1-201ENST00000225655 DMPKQ09013 629 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 GPR18Q14330 331 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 GPR33Q49SQ1 333 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 ZRANB3Q5FWF4 1079 aa17.61■□□□□ 0.41
PFN1-201ENST00000225655 AARS2Q5JTZ9 985 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms