RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ZNF781Q8N8C0 355 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 ZNF599Q96NL3 588 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 IL23AQ9NPF7 189 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 RHBDL2Q9NX52 303 aa18.18■□□□□ 0.5
CLIP2-201ENST00000223398 TIPRLO75663 272 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 GJB5O95377 273 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 MLLT6P55198 1093 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-201ENST00000223398 CCNIQ14094 377 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 TMEM164Q5U3C3 297 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 GSTCDQ8NEC7 633 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 ZNF514Q96K75 400 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-201ENST00000223398 NUAK2Q9H093 628 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 A0A087WXM4 84 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 XKRYO14609 159 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 TMEM63AO94886 807 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 KLF8O95600 359 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-201ENST00000223398 CCNFP41002 786 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 MTX3Q5HYI7 312 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 C22orf39Q6P5X5 142 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 MAGEL2Q9UJ55 1249 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 CORO1CQ9ULV4 474 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-201ENST00000223398 UPK3BL1B0FP48 263 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 UPK3BL2E5RIL1 263 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 GNB5O14775 395 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 MT-ND1P03886 318 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 OLIG2Q13516 323 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 HEPACAMQ14CZ8 416 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 PAOXQ6QHF9 649 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 NMUR2Q9GZQ4 415 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 ANKHQ9HCJ1 492 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 TRPS1Q9UHF7 1281 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 SAMD4AQ9UPU9 718 aaKnown RBP18.17■□□□□ 0.5
CLIP2-201ENST00000223398 LRCH1Q9Y2L9 728 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 PCDHGA11Q9Y5H2 935 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 PNMA8CA0A1B0GUJ8 204 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 GABRDO14764 452 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 IFNGP01579 166 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 BDKRB1P46663 353 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 PCDH1Q08174 1060 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 UPP1Q16831 310 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 MLIPQ5VWP3 458 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 LRRC66Q68CR7 880 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 GALNT18Q6P9A2 607 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 OLFML1Q6UWY5 402 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 PXYLP1Q8TE99 480 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 PIH1D2Q8WWB5 315 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 ADAP2Q9NPF8 381 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 CYP8B1Q9UNU6 501 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 SEPHS1P49903 392 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 TP53INP1Q96A56 240 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 NECTIN3Q9NQS3 549 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 IKZF2Q9UKS7 526 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 TELO2Q9Y4R8 837 aa18.17■□□□□ 0.5
CLIP2-201ENST00000223398 TGFB1P01137 390 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 PTGIRP43119 386 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 ATP1A4Q13733 1029 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 OR4E2Q8NGC2 313 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 CDKN2AIPNLQ96HQ2 116 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 ZSCAN5AQ9BUG6 496 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 EPB41L1Q9H4G0 881 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 EIF2B3Q9NR50 452 aaKnown RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 BBIP1A8MTZ0 92 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 TMEM150CB9EJG8 249 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 G3V2T6 193 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 COCHO43405 550 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 POP7O75817 140 aaKnown RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 NDUFAF6Q330K2 333 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 SPANXN2Q5MJ10 180 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 GATA5Q9BWX5 397 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 TDRD1Q9BXT4 1180 aaKnown RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 RAPGEFL1Q9UHV5 662 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 TCRBV7S3A2A0A539 114 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 OR5F1O95221 314 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 PRR5P85299 388 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 FBXO46Q6PJ61 603 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 HDDC2Q7Z4H3 204 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 COX18Q8N8Q8 333 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 NIPA2Q8N8Q9 360 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 SLC2A6Q9UGQ3 507 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 RBM7Q9Y580 266 aaKnown RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 A0A0D9SEW6 157 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 ZBTB11O95625 1053 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 RB1P06400 928 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 ARRB1P49407 418 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 PTPN5P54829 565 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 KRR1Q13601 381 aaKnown RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 DGUOKQ16854 277 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 PIK3R6Q5UE93 754 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 TMC8Q8IU68 726 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 PLEKHO2Q8TD55 490 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 GPR151Q8TDV0 419 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 MYDGFQ969H8 173 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 PRICKLE1Q96MT3 831 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 HOPXQ9BPY8 73 aaPredicted RBP18.16■□□□□ 0.5
CLIP2-201ENST00000223398 PAAF1Q9BRP4 392 aa18.16■□□□□ 0.5
CLIP2-201ENST00000223398 DUOX1Q9NRD9 1551 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 MFN2O95140 757 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 CREB5Q02930 508 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 SLBPQ14493 270 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLIP2-201ENST00000223398 NEK5Q6P3R8 708 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms