RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 ZNF140P52738 457 aaPredicted RBP12.9□□□□□ -0.34
PLOD3-201ENST00000223127 CAPRIN1Q14444 709 aaKnown RBP12.9□□□□□ -0.34
PLOD3-201ENST00000223127 BCL2A1Q16548 175 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 INO80DQ53TQ3 878 aaPredicted RBP12.9□□□□□ -0.34
PLOD3-201ENST00000223127 FAM109BQ6ICB4 259 aaPredicted RBP12.9□□□□□ -0.34
PLOD3-201ENST00000223127 RETSATQ6NUM9 610 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 ZNF783Q6ZMS7 281 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 TMEM25Q86YD3 366 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 ERLEC1Q96DZ1 483 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 CERS4Q9HA82 394 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 FANCEQ9HB96 536 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
PLOD3-201ENST00000223127 FKBPLQ9UIM3 349 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 ITGB1BP2Q9UKP3 347 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 KRBA1A5PL33 1030 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 CLPXO76031 633 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 BCL10O95999 233 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 HSD17B1P14061 328 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 GFAPP14136 432 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 CAPN3P20807 821 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 IL10P22301 178 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 TMBIM6P55061 237 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 SEMG2Q02383 582 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 ACVR1Q04771 509 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 ITGADQ13349 1161 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 CAMK1Q14012 370 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 PLCL1Q15111 1095 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 ZNF549Q6P9A3 640 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 ZNF773Q6PK81 442 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 TMEM207Q6UWW9 146 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 LARP4Q71RC2 724 aaKnown RBP eCLIP12.9□□□□□ -0.341e-8■□□□□ 10.9
PLOD3-201ENST00000223127 BTLAQ7Z6A9 289 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 FAM217AQ8IXS0 508 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 DDIASQ8IXT1 998 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 MYLIPQ8WY64 445 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 SNX19Q92543 992 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 TAMM41Q96BW9 452 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 TRIM8Q9BZR9 551 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 CMTM6Q9NX76 183 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 INTS6Q9UL03 887 aaKnown RBP12.9□□□□□ -0.34
PLOD3-201ENST00000223127 IRAK3Q9Y616 596 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 MYOFQ9NZM1 2061 aa12.9□□□□□ -0.34
PLOD3-201ENST00000223127 A0A087X1B8 175 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 C1orf232A0A0U1RR37 186 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 BBIP1A8MTZ0 92 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 C9JVG2 144 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 NEDD8-MDP1E9PL57 170 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 UBFD1O14562 309 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 CEP290O15078 2479 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 B4GAT1O43505 415 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 OBSL1O75147 1896 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 SEC14L2O76054 403 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 KCNH1O95259 989 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 JAK1P23458 1154 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 RPS9P46781 194 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 BNIP2Q12982 314 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 TAF1AQ15573 450 aaPredicted RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 FAM83EQ2M2I3 478 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 GRASPQ7Z6J2 395 aaPredicted RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 UBE2Q1Q7Z7E8 422 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 PCYOX1LQ8NBM8 494 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 ST13P5Q8NFI4 369 aaPredicted RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 EXT2Q93063 718 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 C3orf30Q96M34 536 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 CSF3RQ99062 836 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 C1orf50Q9BV19 199 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 LINC00597Q9H2U6 94 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 NLE1Q9NVX2 485 aaPredicted RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 ACTR3BQ9P1U1 418 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 FAM50BQ9Y247 325 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 A0A0J9YYE9 177 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 CYBBP04839 570 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 PTPN2P17706 415 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 CHRM3P20309 590 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 LPOP22079 712 aaPredicted RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 ELK4P28324 431 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 HLA-FP30511 346 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 FMO4P31512 558 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 STX1BP61266 288 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 ADARB1P78563 741 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 PLEKHG6Q3KR16 790 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 CCNYL2Q5T2Q4 361 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 GSTO2Q9H4Y5 243 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 EML4Q9HC35 981 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 PKD2L2Q9NZM6 624 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 STX7O15400 261 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 CNOT3O75175 753 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 IPO13O94829 963 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 MTHFD1P11586 935 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 TSPAN8P19075 237 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 CES1P23141 567 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 OPRL1P41146 370 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 POLD2P49005 469 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 KPNA2P52292 529 aaKnown RBP12.89□□□□□ -0.35
PLOD3-201ENST00000223127 TRIM16LQ309B1 348 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 ZRANB3Q5FWF4 1079 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 XAF1Q6GPH4 301 aa12.89□□□□□ -0.35
PLOD3-201ENST00000223127 CPXM2Q8N436 756 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms