RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PCDH10Q9P2E7 1040 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 ARHGAP20Q9P2F6 1191 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 EFCAB6Q5THR3 1501 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 C2orf74A8MZ97 194 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 CCKBRP32239 447 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 CDH11P55287 796 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 HERV-K104P61576 105 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 MSANTD2Q6P1R3 559 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC38A4Q969I6 547 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 KCNS2Q9ULS6 477 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 PLEKHG4Q58EX7 1191 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF676Q8N7Q3 588 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 POGLUT1Q8NBL1 392 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 VSTM5A8MXK1 200 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 NEDD8-MDP1E9PL57 170 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 F8VP50 259 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 MATN2O00339 956 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 TSGA10IPQ3SY00 556 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 JAGN1Q8N5M9 183 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 SEC14L1Q92503 715 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 NINJ1Q92982 152 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 HTATIP2Q9BUP3 242 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 RCOR3Q9P2K3 495 aaPredicted RBP14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 PDE10AQ9Y233 779 aa14.43□□□□□ -0.1
SPTLC2-201ENST00000216484 WFS1O76024 890 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CDH12P55289 794 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CD47Q08722 323 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 PHC3Q8NDX5 983 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF431Q8TF32 576 aaPredicted RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 RIT1Q92963 219 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 L2HGDHQ9H9P8 463 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 LRRC72A6NJI9 287 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 VIPP01282 170 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC3A1Q07837 685 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 OR8S1Q8NH09 359 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 MTMR8Q96EF0 704 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 SEC61A2Q9H9S3 476 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 C1orf109Q9NX04 203 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 SHANK2Q9UPX8 1470 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 UMODL1Q5DID0 1318 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 HHLA1C9JL84 531 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 ASLP04424 464 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 GLRA2P23416 452 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 NXPE1Q8N323 547 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CHST7Q9NS84 486 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 WASF3Q9UPY6 502 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 SRRM3A6NNA2 597 aaPredicted RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CLDN9O95484 217 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 EIF1AXP47813 144 aaKnown RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CFAP52Q8N1V2 620 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 RNF19AQ9NV58 838 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 PNPOQ9NVS9 261 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 USP20Q9Y2K6 914 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CCDC88AQ3V6T2 1871 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 TEX13DA0A0J9YY54 714 aaPredicted RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 EIF1AYO14602 144 aaKnown RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 FARS2O95363 451 aaKnown RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 ADH1CP00326 375 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 INSRRP14616 1297 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CHKAP35790 457 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 LRRC37A5PQ49AS3 106 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 METTL3Q86U44 580 aaKnown RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 KCTD7Q96MP8 289 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 ULBP1Q9BZM6 244 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 MSRAQ9UJ68 235 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 TRUB2O95900 331 aaKnown RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 FMO3P31513 532 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC5A3P53794 718 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 PRPF38BQ5VTL8 546 aaKnown RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 FAM183BPQ6ZVS7 135 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF598Q86UK7 904 aaKnown RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 POLR2J2Q9GZM3 115 aaKnown RBP14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CDH22Q9UJ99 828 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 CAMSAP1Q5T5Y3 1602 aa14.42□□□□□ -0.1
SPTLC2-201ENST00000216484 NLRP1Q9C000 1473 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 ITGA10O75578 1167 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 RPP14O95059 124 aaKnown RBP14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 EDNRAP25101 427 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 CTHP32929 405 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 PSEN1P49768 467 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC26A5P58743 744 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC27A1Q6PCB7 646 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 TRIM74Q86UV6 250 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 TRIM73Q86UV7 250 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 TOMM5Q8N4H5 51 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 SLC37A3Q8NCC5 494 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 WNT8BQ93098 351 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 MUC13Q9H3R2 512 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 SCN2AQ99250 2005 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 GOT1P17174 413 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 MAGEA8P43361 318 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 KCNJ5P48544 419 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 SAMD7Q7Z3H4 446 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 MREGQ8N565 214 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 ZNF527Q8NB42 609 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 LRRN4Q8WUT4 740 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 CENPMQ9NSP4 180 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 PRR5-ARHGAP8B1AHC4 643 aa14.41□□□□□ -0.1
SPTLC2-201ENST00000216484 RECQL4O94761 1208 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms