RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 CYP2S1Q96SQ9 504 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 DUSP16Q9BY84 665 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TCF7L1Q9HCS4 588 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MOCS1Q9NZB8 636 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 BORCS7-ASMTA0A0B4J1R7 106 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 C17orf113A0A1B0GUU1 675 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PDPK1O15530 556 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PRKD3O94806 890 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 RCBTB2O95199 551 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PSKH1P11801 424 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 FSHRP23945 695 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SEPT12Q8IYM1 358 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 RASGEF1CQ8N431 466 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SNRNP27Q8WVK2 155 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 TSEN15Q8WW01 171 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 SEC14L1Q92503 715 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 NKD2Q969F2 451 aaPredicted RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 GBA3Q9H227 469 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 S100A14Q9HCY8 104 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TESMINQ9Y4I5 508 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 OR2AT4A6NND4 320 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF33BQ06732 778 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 IKBKEQ14164 716 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 DHCR24Q15392 516 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PUS10Q3MIT2 529 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 KLHL36Q8N4N3 616 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ZSCAN1Q8NBB4 408 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 STOML3Q8TAV4 291 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 C1GALT1C1Q96EU7 318 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF599Q96NL3 588 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 HAPLN3Q96S86 360 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 IFT27Q9BW83 186 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TUBB1Q9H4B7 451 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MRM3Q9HC36 420 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 ENY2Q9NPA8 101 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 XPNPEP3Q9NQH7 507 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 DNAJC11Q9NVH1 559 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MS4A12Q9NXJ0 267 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 FANCMQ8IYD8 2048 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PHYHO14832 338 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 C21orf2O43822 256 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TRUB2O95900 331 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 GKN3PP0CG01 181 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ACTBP60709 375 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ERVK-24P63145 666 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ACTG1P63261 375 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 OVGP1Q12889 678 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 GNMTQ14749 295 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 LLGL2Q6P1M3 1020 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 NIPA2Q8N8Q9 360 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 FAM98AQ8NCA5 519 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 OR4A15Q8NGL6 344 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ACDQ96AP0 544 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 NDC1Q9BTX1 674 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ELL3Q9HB65 397 aaPredicted RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 POLE4Q9NR33 117 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ZIM2Q9NZV7 527 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CDH22Q9UJ99 828 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 FBXO10Q9UK96 956 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 MAFFQ9ULX9 164 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 A0A0J9YYE9 177 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 LARGE1O95461 756 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PRAMEF1O95521 474 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 IL1R1P14778 569 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SHMT1P34896 483 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 AKR1D1P51857 326 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 NDST1P52848 882 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CRISP3P54108 245 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SEMA5AQ13591 1074 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 BLMHQ13867 455 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SPESP1Q6UW49 350 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 C3orf67Q6ZVT6 689 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TRABD2AQ86V40 505 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF570Q96NI8 536 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 RNF157Q96PX1 679 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CYP4F12Q9HCS2 524 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 C1orf109Q9NX04 203 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 KLQ9UEF7 1012 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 TBC1D24Q9ULP9 559 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ZNF487B1APH4 448 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 L7N2F9 121 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 KLF11O14901 512 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 B4GALT4O60513 344 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 HLA-DPB1P04440 258 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CCNCP24863 283 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 DPP6P42658 865 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 AVPR1BP47901 424 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CLCN7P51798 805 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 VAMP2P63027 116 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SLC10A7Q0GE19 358 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PGM5Q15124 567 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 PDSS1Q5T2R2 415 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 NDNQ99608 321 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 SPATC1LQ9H0A9 340 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 NUDT15Q9NV35 164 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 CHKBQ9Y259 395 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 FARSAQ9Y285 508 aaKnown RBP6□□□□□ -1.45
VPS13D-201ENST00000011700 FPGTO14772 594 aa6□□□□□ -1.45
VPS13D-201ENST00000011700 ALPPL2P10696 532 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms