RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 KRT87PA6NCN2 255 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 EIF3FO00303 357 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 TAPBPO15533 448 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 RNGTTO60942 597 aaKnown RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 DCTN3O75935 186 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 CDK14O94921 469 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 PAK4O96013 591 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 ENO3P13929 434 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 PBLDP30039 288 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 PREPP48147 710 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 SH3BP2P78314 561 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 GALNT1Q10472 559 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 BCL7AQ4VC05 210 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 EOGTQ5NDL2 527 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 ZNF483Q8TF39 744 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 HIC2Q96JB3 615 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 LRRC37BQ96QE4 947 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 CCM2Q9BSQ5 444 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 C1QTNF2Q9BXJ5 285 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 NMUR2Q9GZQ4 415 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 WWP1Q9H0M0 922 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 SLC5A10A0PJK1 596 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 ATG13O75143 517 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 SLCO2B1O94956 709 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 GUCA1CO95843 209 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 CHRNB1P11230 501 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 GABRG2P18507 467 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 RPS21P63220 83 aaKnown RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 CDK3Q00526 305 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 LACTB2Q53H82 288 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 GPR153Q6NV75 609 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 KIAA1324Q6UXG2 1013 aaKnown RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 RAB44Q7Z6P3 723 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-232ENST00000641947 CLNKQ7Z7G1 428 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 RASGRP3Q8IV61 690 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 FLCNQ8NFG4 579 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 FOXJ1Q92949 421 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 PPP1R36Q96LQ0 422 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 TMEM79Q9BSE2 394 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 EPHX3Q9H6B9 360 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 DNAH14Q0VDD8 3507 aa17.25■□□□□ 0.35
PHGDH-232ENST00000641947 E2F3O00716 465 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 HDAC3O15379 428 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 SNX2O60749 519 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 MPC1LP0DKB6 136 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 CLCQ05315 142 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 INPP5AQ14642 412 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 PDCD2Q16342 344 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-232ENST00000641947 TTC31Q49AM3 519 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-232ENST00000641947 C11orf96Q7Z7L8 435 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 TRPC4APQ8TEL6 797 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 ASB11Q8WXH4 323 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 OR52B2Q96RD2 323 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 TRMOQ9BU70 441 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 NUF2Q9BZD4 464 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 FZD3Q9NPG1 666 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 SEMA4BQ9NPR2 832 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-232ENST00000641947 ZFP69BQ9UJL9 534 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 PTBP2Q9UKA9 531 aaKnown RBP17.24■□□□□ 0.35
PHGDH-232ENST00000641947 FZD4Q9ULV1 537 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 SCML1Q9UN30 329 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 PDE10AQ9Y233 779 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 FIS1Q9Y3D6 152 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 OR1A2Q9Y585 309 aa17.24■□□□□ 0.35
PHGDH-232ENST00000641947 KRBA1A5PL33 1030 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 QSOX1O00391 747 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 FCHO1O14526 889 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 DIAPH2O60879 1101 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 KIAA0754O94854 1291 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 TARSP26639 723 aaKnown RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 PDHA2P29803 388 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 PRDX3P30048 256 aaKnown RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 MAT2AP31153 395 aaKnown RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 IGFALSP35858 605 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 FOXA1P55317 472 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 ZBTB16Q05516 673 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 ZXDCQ2QGD7 858 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 PLA2G4EQ3MJ16 856 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 ANKS6Q68DC2 871 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 CLEC6AQ6EIG7 209 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 KIAA1161Q6NSJ0 714 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 DOK6Q6PKX4 331 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 CRTC3Q6UUV7 619 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 USP30Q70CQ3 517 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 HORMAD1Q86X24 394 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 TRAPPC5Q8IUR0 188 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 AGAP11Q8TF27 550 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 ASZ1Q8WWH4 475 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 TEX101Q9BY14 249 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 WDR55Q9H6Y2 383 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 ARMCX1Q9P291 453 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 ZNF225Q9UK10 706 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 TMCO1Q9UM00 188 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 SLC12A4Q9UP95 1085 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 PRKAB1Q9Y478 270 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 GOLGA8QA0A0J9YX86 632 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 GOLGA8OA6NCC3 632 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 GOLGA8NF8WBI6 632 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 KPNA5O15131 536 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms