RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 SEPT3Q9UH03 358 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 RAI2Q9Y5P3 530 aa16.3■□□□□ 0.2
HNRNPU-228ENST00000640306 G3V2T6 193 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 K7EPI3 171 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 BCL10O95999 233 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 MBL2P11226 248 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 CTPS1P17812 591 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 LPOP22079 712 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 OXCT1P55809 520 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 IL1RL1Q01638 556 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 DUSP4Q13115 394 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNF829Q3KNS6 432 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 FAM174BQ3ZCQ3 159 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 XAF1Q6GPH4 301 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 GOLGA7Q7Z5G4 137 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNF598Q86UK7 904 aaKnown RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 KRTCAP2Q8N6L1 136 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 OR2T12Q8NG77 320 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 NCLNQ969V3 563 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 C8orf48Q96LL4 319 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 DOK1Q99704 481 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 ADGRE2Q9UHX3 823 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 MAGEL2Q9UJ55 1249 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 TOR1BO14657 336 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 OCM2P0CE71 109 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 OCMP0CE72 109 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 RAP2AP10114 183 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 IRF1P10914 325 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 SREBF2Q12772 1141 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 ITGADQ13349 1161 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 NR1D2Q14995 579 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 TAF1AQ15573 450 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 BROXQ5VW32 411 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 SULT1C3Q6IMI6 304 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 RTN4RL1Q86UN2 441 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 SNX29P2Q8IUI4 249 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 OR6K2Q8NGY2 324 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 TSPEARQ8WU66 669 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 FATE1Q969F0 183 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNF583Q96ND8 569 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 MGME1Q9BQP7 344 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 BEGAINQ9BUH8 593 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 MUC13Q9H3R2 512 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 IPPKQ9H8X2 491 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 ZNF639Q9UID6 485 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 PCDHB3Q9Y5E6 796 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 GREB1Q4ZG55 1949 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 TYW5A2RUC4 315 aaKnown RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 MOXD2PA6NHM9 499 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 OR7A17O14581 309 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 AXIN1O15169 862 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 B3GALT4O96024 378 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 C7P10643 843 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 TTKP33981 857 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 TXNDC11Q6PKC3 985 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 RSPO2Q6UXX9 243 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 THAP5Q7Z6K1 395 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 C8orf59Q8N0T1 100 aaPredicted RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 CLDN19Q8N6F1 224 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 PDPRQ8NCN5 879 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 CCDC138Q96M89 665 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 UROC1Q96N76 676 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 TDRD1Q9BXT4 1180 aaKnown RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 GPR62Q9BZJ7 368 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 AMBRA1Q9C0C7 1298 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 COMMD8Q9NX08 183 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 SELENONQ9NZV5 590 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 AGO1Q9UL18 857 aaKnown RBP16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 INVSQ9Y283 1065 aa16.29■□□□□ 0.2
HNRNPU-228ENST00000640306 PATJQ8NI35 1801 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 NUP214P35658 2090 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 A8MX80 341 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 ARVCFO00192 962 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 LSM1O15116 133 aaKnown RBP16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 HS6ST1O60243 411 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 OAZ2O95190 189 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 PARNO95453 639 aaKnown RBP16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 GSNP06396 782 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 PLA2G16P53816 162 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 CTU2Q2VPK5 515 aaKnown RBP16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 GCNT7Q6ZNI0 430 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 BTLAQ7Z6A9 289 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 RBM23Q86U06 439 aaKnown RBP16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 CENPSQ8N2Z9 138 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 PAF1Q8N7H5 531 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 FRS2Q8WU20 508 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 PEX13Q92968 403 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 SDCCAG3Q96C92 435 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 FAM193BQ96PV7 902 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 PSKH2Q96QS6 385 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 GKN1Q9NS71 199 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 Q9Y3F1 56 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 PRKD3O94806 890 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 GJB5O95377 273 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 FUCA1P04066 466 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 TPP2P29144 1249 aaPredicted RBP16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 MAPKAPK2P49137 400 aa16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 LSM3P62310 102 aaKnown RBP16.28■□□□□ 0.2
HNRNPU-228ENST00000640306 PHEXP78562 749 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms